KEGG   Stenotrophomonas sp. LM091: BIZ42_09865
Entry
BIZ42_09865       CDS       T04630                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
slm  Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:slm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slm03400]
    BIZ42_09865
Enzymes [BR:slm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BIZ42_09865
DNA repair and recombination proteins [BR:slm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BIZ42_09865
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 SLFN-g3_helicase AAA_12 AAA_11
Other DBs
NCBI-ProteinID: AOX62487
UniProt: A0A1D8YA75
Position
2278092..2280068
AA seq 658 aa
MHGLNPPQHAAVMHCEGPLLVLAGAGSGKTRVIVEKIGQLIASKRYPARRIAAITFTNKS
AKEMRERVAKRLRGDDADEVTICTFHALGLKFLQIEHAAVGLKRGFSIFDADDSTAQVKD
LMHGAKPDDIEDVKNLISRAKNAGLSPEQAMAAARSTREKEAASVYERYQLRLTAFNAVD
FDDLIRLPVQVLEENPEIALAWRERIGYLLVDECQDTNDAQYRLLKQLAGSKGNFTCVGD
DDQSIYAWRGANPENLQQMARDYPALEIIKLEQNYRCSNRVLRAANALIANNPHEHLKKL
WSDQADGERIRVWECRNSEHEAEKVAAEISFLATSRKIPWSDFCILFRGNFQSRPLEKAL
QLVRAPYHITGGTAFLERQEVKDTLSWLRLLVNPDDDTAFMRAVQSPKREVGAGTLAKLA
ELASEKDLPMAHAAEAIGALSQLPPRAANGLSRFTDILRDLRAEMPKLSSGDLVRKLVKE
SGLVSDLRSSCKEESVYQRRLGNLEELAQWFEGGPRGASTADLAAQLALLSRNDKDDGGN
QVRMMTLHASKGLEFPYVFIIGCEDGVLPHQVSLDEGNLQEERRLLYVGITRAKVQLWMS
YSKLTRKFGEHVRLKPSRFFEEIPAEEMQRDGADPVADAARKKERANAGLAAIQALFD
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgcacggtctcaatcctccccaacacgcggcagtgatgcactgcgaaggtcctctgctg
gtgctcgccggcgcgggcagcggcaagacgcgcgtgatcgtggagaagatcggccagctg
atcgccagcaagcgctacccggcgcggcggatcgcggcgatcaccttcaccaacaaatcg
gccaaggaaatgcgcgagcgcgtggccaagcgcctgcgcggtgacgatgccgatgaagtg
acgatctgtaccttccacgcgctggggctgaagttcctgcagatcgaacacgctgcggtg
gggctcaagcgcgggttctccatcttcgatgccgacgattcgaccgcacaggtcaaggac
ctgatgcacggggccaagccggacgacatcgaggacgtgaagaacctgatctcgcgcgcc
aagaacgccggcctctcacccgagcaggcgatggccgcggcgcgcagcacgcgcgagaag
gaagcggccagcgtctatgagcgctaccagctgcgtttgacggccttcaacgcggtcgat
ttcgatgatctgatccgcctgccggtgcaggtgctggaagaaaacccggagatcgcactg
gcctggcgcgagcgcatcggctacctgctggtggacgaatgccaggacaccaacgatgcc
cagtaccggctgctcaagcagctggccggcagcaagggcaacttcacctgcgtgggcgat
gacgatcagtcgatctacgcctggcgcggtgcgaacccggaaaacctgcagcagatggcg
cgcgactacccggcgctggaaatcatcaagctggagcagaactaccgctgctccaaccgc
gtgctgcgcgcggccaacgcactgatcgccaacaacccgcacgaacacctgaagaagctg
tggagcgaccaggccgacggcgagcgcatccgcgtgtgggagtgccgcaacagcgagcat
gaagcggaaaaagtggccgcggagatttcgttcctggcgacgtccaggaagattccgtgg
agcgatttctgcatcctgttccgcggcaacttccagtcgcggccgctggaaaaagcgctg
cagctggtgcgcgcgccgtaccacatcaccggcggcaccgcgttcctggaacggcaggag
gtcaaggacacgctgtcctggctgcgcctgctggtgaacccggacgacgatacggcgttc
atgcgtgcggtgcagtcgcccaagcgcgaagtgggggccggcaccctggccaagctggcc
gagctggcctcggaaaaggatctgccgatggcgcatgccgccgaagcgatcggtgcgctc
tcgcagttgccgccgcgcgcggccaatggcctgagccgcttcaccgacatcctgcgcgac
ctgcgtgcggagatgcccaagctcagctccggcgacctggtgcgcaagctggtgaaggaa
tccgggctggtctcggatctgcgtagttcgtgcaaagaagaatcggtgtaccagcgtcgc
ctcggcaacctggaagaactggcgcagtggttcgagggcggcccgcgcggtgcctccacc
gccgatctggccgcgcagctggcactgctctcgcgcaacgacaaggacgacggtggcaac
caggtgcggatgatgaccctgcacgcctccaagggcctggaattcccgtacgtgttcatc
atcggctgcgaggacggcgtgctgccgcaccaggtcagcctggacgaaggcaacctgcag
gaagagcgacgcctgctgtacgtgggcatcacccgtgccaaggtgcagctgtggatgagc
tacagcaagctcacccgcaaattcggcgagcacgtgcggctcaagccgagccgcttcttc
gaagagataccggcggaggaaatgcagcgcgatggcgccgatcccgtcgccgacgccgcg
cgcaagaaagagcgcgccaacgcaggcctggctgcgatccaggccctcttcgactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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