KEGG T01951: SLUG

Staphylococcus lugdunensis N920143: SLUG_12880

Entry

SLUG_12880        CDS       T01951

Symbol

aspS

Name

(GenBank) aspartyl-tRNA synthetase

K01876

aspartyl-tRNA synthetase [EC:6.1.1.12]

Organism

sln Staphylococcus lugdunensis N920143

Pathway

sln00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:sln00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SLUG_12880 (aspS)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sln01007]
    SLUG_12880 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sln03016]
    SLUG_12880 (aspS)
   03029 Mitochondrial biogenesis [BR:sln03029]
    SLUG_12880 (aspS)
Enzymes [BR:sln01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     SLUG_12880 (aspS)
Amino acid related enzymes [BR:sln01007]
Aminoacyl-tRNA synthetase
  Class II (A)
   SLUG_12880 (aspS)
Transfer RNA biogenesis [BR:sln03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SLUG_12880 (aspS)
Prokaryotic type
   Other AARSs
    SLUG_12880 (aspS)
Mitochondrial biogenesis [BR:sln03029]
Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    SLUG_12880 (aspS)

SSDB

Motif

Pfam:

tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2d

Other DBs

NCBI-ProteinID:

CCB53768

Position

1362750..1364516

AA seq 588 aa
MTKRTTYCGLVTEELLGEKITLKGWVHNRRDLGGLIFIDLRDREGIVQIVFNPAFSQEAL
NIAETVRSEYVVEVQGQVTKRDPETINPKIKTGQVEVQVSHIEVINKSETPPFSINEENQ
NVDENIRLKYRYLDLRRTELAQTFKMRHQITQSIRHYLDNNGFFDIETPVLTKSTPEGAR
DYLVPSRVHEGEFYALPQSPQLFKQLLMISGFDKYYQIVKCFRDEDLRADRQPEFTQVDI
EMSFVDQEDVMAMGEEMLRKVVKEVKGIDVEGPFPRMTYNEAMSRYGSDKPDTRFDMELI
DVSKLGTEMDFKVFKDTVNQNGQVKAIVAKGAADNYTRKDMDGLTEFVNIYGAKGLAWVK
VVEEGLSGPIARFFEDANVATLTELTGAEPGDLVMFVADKPNVVAQSLGALRIKLAKELG
LIDETKLNFLWVTDWPLLEYDEDAKRYVAAHHPFTSPKEEDIKKLDSEPENAQANAYDIV
LNGYELGGGSIRIHHGVLQEKMFEVLGFTKEQAQEQFGFLLDAFKYGAPPHGGIALGLDR
LVMLLTNRTNLRDTIAFPKTASATCLLTDAPSDVSDKQLQELSLRIRH

NT seq 1767 nt +upstreamnt +downstreamnt
atgactaagagaacaacatactgtggccttgtaacagaagaattattgggagaaaaaata
acgttaaaaggatgggtgcataatcgccgtgatttaggtggtttaatttttattgactta
agagatagagagggtattgttcaaatcgtatttaaccctgctttctcacaagaagcactt
aatattgcagaaactgttcgttcagaatatgtagttgaagtacagggacaagtaacaaaa
cgtgatccagaaactataaatcctaaaatcaaaacaggacaagttgaggttcaagtttct
catattgaagtaattaataaatctgaaacaccaccattttcaatcaacgaagaaaatcaa
aatgtagatgaaaatatacgtttaaaatatcgctacctagatttaagacgcaccgaatta
gcacaaacatttaaaatgagacatcaaattacgcaatcaattcgtcactatcttgataat
aatggctttttcgacattgaaacacccgttttaacaaaatcgactcctgaaggtgcccgt
gactatttagttccttctcgtgtccacgaaggtgaattttacgctttaccacaatctcca
cagctatttaagcaattattaatgattagtggtttcgataaatattatcaaattgttaaa
tgtttccgcgatgaagacttacgtgctgatcgccaacctgaatttactcaagtcgatatt
gagatgagctttgtagaccaagaagatgtaatggctatgggcgaagaaatgctacgaaaa
gttgttaaagaagtaaaaggtattgatgttgaagggccattcccacgcatgacatacaac
gaagctatgagtcgttatggttctgataagcctgacactcgttttgatatggaattaatt
gatgtgtcgaaacttggaacagaaatggactttaaggtatttaaagatacagttaatcaa
aacggtcaagtcaaagcaattgttgccaaaggtgcagccgacaactatacacgtaaagat
atggatgggttaactgaatttgttaatatatacggtgctaaaggattagcttgggtcaaa
gtagttgaggaagggttaagtggccctattgctcgattctttgaagatgctaatgtagcg
acattaactgagttaacgggggcagagccaggagatttggttatgtttgtggctgataaa
cctaatgttgtggcacaaagcctaggtgcactgcgtatcaaacttgcaaaagagctaggt
ttaattgatgaaacaaagctaaacttcttatgggtaactgattggccattacttgaatat
gacgaagatgcaaaaagatatgttgcagcacaccatccattcacttcaccaaaagaagaa
gatattaaaaaattagattctgaacctgaaaatgcgcaagccaatgcatatgatattgta
ttaaatggctatgaattaggtggtggttctattagaattcatcatggtgtcttacaagaa
aaaatgtttgaagttttaggatttactaaagaacaagcccaagaacagttcggcttctta
ttagatgcctttaaatatggtgcaccgccacatggtggaatagctctaggtttggacaga
ttagttatgttattgacaaatcgaactaacttaagagatacaattgcattccctaaaact
gcatcagcaacttgtctattaaccgatgcacctagcgacgtgtctgataaacaattacaa
gaattatcacttagaattcgacattaa

All links

Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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