KEGG   Shewanella loihica: Shew_0207
Entry
Shew_0207         CDS       T00489                                 
Name
(GenBank) penicillin-binding protein, 1A family
  KO
K05366  penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
Organism
slo  Shewanella loihica
Pathway
slo00550  Peptidoglycan biosynthesis
slo01100  Metabolic pathways
slo01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:slo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Shew_0207
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Shew_0207
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:slo01003]
    Shew_0207
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:slo01011]
    Shew_0207
Enzymes [BR:slo01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     Shew_0207
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Shew_0207
Glycosyltransferases [BR:slo01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   Shew_0207
Peptidoglycan biosynthesis and degradation proteins [BR:slo01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   Shew_0207
SSDB
Motif
Pfam: Transgly PCB_OB Transpeptidase
Other DBs
NCBI-ProteinID: ABO22079
UniProt: A3Q9D1
Position
complement(220944..223529)
AA seq 861 aa
MKWFKRITIALFSLALLGIGAIAAAYFYVLPDLPDVTTLKTVKLQTPLRIYSADGKLISQ
FGEKRRIPVEYEQVPQQLINAVLDTEDARFFEHKGIDPIGIIRAAVILATTGKKSQGAST
ITQQVARGFFLSREKTYIRKIKEIFLALKIEQALSKKEILTLYLNRSFLGNRAYGVGAAA
QVYYGKELEELTLPEMAMIAGLPQAPSAANPIRNPARAMNRRNWVLSRMLEKENITPDEY
QEAIRAPITAKYHGAEVELYAPYISEMARDYLVEKLGEEEAYTGGYNVYTTVDSRLQMLA
QEALRNNVYAYDERHGYRGATKVLWDAEGTAKLDETQIVTQLKQTQGFQGLEPAAVLEVA
EQSVKVINAKGETLTLEWEGLKWARKFISNKRQGKAPKTAGEILKAGEQVWIRNNGNIWQ
LSQIPEVASAIVSLDPKDGAIRTLVGGYSFHTSQYNRVTQAKRQLGSNIKPFIYTGALEK
GYTLATLINNAPINNADIRQGTAWRPKNSPDKYTGPTRLRVGLAQSINVMSVRAMRYTGL
ESAIDTLVKFGFDRDDLPQNESLALGSPSVTPLQVVTAFSVFANGGYRVEPYFIDHIDNA
YEQTVEEASPTLACKPELIQPQTLPTDDPFAAMAQELPKHEVANQEVEGLEVASQEANAE
DPSCPSTARHAPQIISKQTAFLITEALKSVIWGGGDWSKGTGWNGTAWRAARVVNRHDIA
GKTGTTNESKDTWFSGFTPTLATTVWVGFDDHSIELGRTAWNTNGAKDQISGAEAGAKTA
GPGWNEFMKNALQGTPELPSPPPEGIVSARIDLATGKLSRKTDYTTKFEYFIQGTEPKEF
ATEAQTQEDIFIDDSVEDLFQ
NT seq 2586 nt   +upstreamnt  +downstreamnt
gtgaagtggtttaaacgaattaccatcgctctatttagcctagcccttttgggaataggt
gcaattgctgcggcctatttttatgtgctaccggacctccccgatgttaccactcttaaa
accgtaaaattgcaaactccattacgaatttacagcgctgatggcaaattaatttcacaa
tttggcgaaaaacgtcgcattccagtcgaatatgagcaggtaccgcaacaattaattaat
gcggtgctcgacacagaagacgcccgcttcttcgaacataaggggatagaccccataggc
atcatacgtgccgcagtgattctggctaccacaggtaagaagagccaaggggcaagtacc
atcacccagcaggttgcccgcggcttcttcctctccagagagaagacctacattcgtaag
atcaaagagatcttcctggccctgaaaatcgagcaagccctgagtaagaaagagatctta
accctctatctcaaccgctctttcctgggtaaccgcgcctatggtgtcggagccgccgct
caggtctactatggcaaggaactcgaggagctcactctgcctgagatggccatgattgcc
ggtctgccacaggcgccttctgccgccaaccctatacgtaatccggcccgtgcgatgaat
cgtcgcaactgggtactcagccgtatgctggagaaagagaacattaccccggacgagtat
caggaagcaattagagcccctatcaccgccaagtaccatggcgccgaggtagagctctat
gcgccttacatctcagagatggcacgcgactatctggtcgaaaaactcggtgaagaggaa
gcctataccggcggttacaacgtctacaccactgtcgactctcgcctgcagatgctggcc
caagaggcactgcgcaataacgtctacgcctatgacgagcgccacggctatcgcggcgcg
actaaggtgttatgggacgcagaaggcacggccaagctagatgagacccaaatcgtcaca
cagctgaagcaaacccaaggcttccaaggactcgagcccgccgccgtgctcgaggttgcc
gagcagagcgtcaaggtcatcaatgcgaagggcgaaaccctcactctggagtgggaaggt
cttaagtgggcgcgcaagttcatcagcaacaagcgtcagggcaaggcgcctaagacggct
ggcgagatcctcaaggcaggcgagcaggtctggatccgcaacaacgggaacatctggcag
ctatcgcaaattcctgaggtggccagcgccatcgtctcgctggatcctaaggacggtgcc
atcaggaccctagtgggcggctacagcttccacaccagccaatacaaccgtgtcacccag
gccaagcgtcagctgggctccaacatcaagcccttcatctatacaggtgcgctggagaaa
ggttacaccctggcgacgctgatcaacaacgcgccgatcaacaatgccgacatacgtcag
ggcacagcatggcgacctaagaactcgcccgacaagtatactgggccgacacgcctgaga
gtcggtctggcacagtctattaacgtcatgtcggtacgcgccatgcgctataccgggcta
gagagcgctatcgacaccctggtcaagttcggtttcgaccgcgacgatctgccgcaaaac
gaatcactggcgctgggttcaccttcggtgacgccgctgcaggtggtcaccgccttctcg
gtatttgcaaatggcggctaccgggtcgagccttactttatcgaccatatcgacaatgcc
tacgagcagacggtagaagaagccagccctacgctagcctgtaagcctgagttaattcag
ccacagacgctgccaaccgacgatccttttgcagcgatggcgcaggaactgcctaagcac
gaagtggcaaatcaagaggtagaaggcctagaagtcgcgagccaagaagctaacgccgaa
gatcctagctgtccgagcacggctcgccacgcaccgcagatcatcagcaaacagacggcc
ttcctgatcaccgaagccctgaagagcgtaatctggggcggtggcgattggagcaagggc
acaggctggaacggcaccgcctggcgcgccgcccgtgtggtaaatcgccacgatatcgcc
ggtaagacaggtaccaccaacgaatcgaaagatacttggttcagtggcttcacaccgacg
ctggcaactaccgtatgggtcggcttcgacgatcacagcatcgaactgggccgcaccgcc
tggaataccaacggcgcgaaagatcagatctcgggcgccgaggccggtgcaaagaccgcc
ggcccaggctggaacgagtttatgaaaaacgccctccaaggcacgcctgagctaccttct
cctccaccggaagggatcgtctcggcccgtatcgacctggccacaggcaagttaagccgt
aagacagactacaccaccaagttcgagtatttcattcagggtaccgagccgaaggaattt
gccaccgaggcgcagactcaggaagatatctttatcgacgattcagtagaagatctgttc
caatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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