KEGG   Shewanella loihica: Shew_2246
Entry
Shew_2246         CDS       T00489                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
slo  Shewanella loihica
Brite
KEGG Orthology (KO) [BR:slo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slo03009]
    Shew_2246
Enzymes [BR:slo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     Shew_2246
Ribosome biogenesis [BR:slo03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Shew_2246
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ABO24112
UniProt: A3QF64
Position
complement(2625784..2626665)
AA seq 293 aa
MKSLLMSEKLQKVLARAGHGSRREMEAWIAAGRVSIDGEIAKLGDRIEADAKVRIDGRTV
SIKSEDDLVCRVIAYHKPEGEICSRKDPEGRPTVFDRLPKTRDSRWVAVGRLDINTSGLL
LFTSDGELANRLMHPSHEVEREYAVRTFGEVTDACIQRLRSGVTLEDGPAHFDKIKPAGG
EGMNKWWHVSLAEGRNREVRRLWESQEVQVSRLIRIRYGMIDLPKSLPRGGWVELPIEQV
NYLRKLAGMDEETRTLLGTDKHSVARAKVKSAKIRRAVRKHKTTAGKTPRQRS
NT seq 882 nt   +upstreamnt  +downstreamnt
atgaagagtctactaatgagtgaaaaattgcagaaagtcttggcccgtgcaggccatggc
tcccgtcgtgagatggaggcatggattgctgcaggtcgagttagtatagacggtgaaatt
gccaaacttggtgatcgtatcgaggccgatgccaaggtgcgtatcgatggtcgtacggta
tctattaagtcggaagacgacttggtgtgccgtgtgatcgcctatcacaagcctgaaggg
gagatctgcagccgcaaagatcccgaagggcgcccgacggtattcgaccgtctgcctaag
acccgagattctcgctgggttgcggtaggtcgtctggatatcaacacctcaggcttgttg
ctgtttacctctgacggtgagctggccaaccgcctgatgcacccgtctcatgaggtggag
cgtgaatacgccgtgcgcacctttggagaggtgaccgatgcctgcattcagcgtctgcgc
agcggcgtaaccttggaagatggcccggcgcatttcgataagataaagccagccggtggc
gagggcatgaataaatggtggcatgtgtcgctggccgaaggccgtaaccgtgaggttcgc
cgcctgtgggaatcacaggaagtgcaggtgagccgcctgatccgtattcgctacggcatg
atagatctgcctaaatccctgcctcgaggtggttgggtcgagctgccaattgagcaggtg
aactatctgcgtaagctggccggcatggatgaggagacgcgcaccctgctgggtacagac
aaacacagtgtggcccgcgccaaggtgaaaagcgccaagatccgccgcgccgtgcgtaag
cacaagaccacagcgggtaaaacgccgcgtcaacgcagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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