KEGG T00489: Shew

Shewanella loihica: Shew_2761

Entry

Shew_2761         CDS       T00489

Name

(GenBank) conserved hypothetical protein

K06968

23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]

Organism

slo Shewanella loihica

Brite

KEGG Orthology (KO) [BR:slo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slo03009]
    Shew_2761
Enzymes [BR:slo01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.186  23S rRNA (cytidine2498-2'-O)-methyltransferase
     Shew_2761
Ribosome biogenesis [BR:slo03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Shew_2761

SSDB

Motif

Pfam:

RLMM_N RlmM_FDX FtsJ

Other DBs

NCBI-ProteinID:

ABO24627

UniProt:

A3QGM9

Position

complement(3266754..3267845)

AA seq 363 aa
MINLFLYCRAGYEKDCAAEIQQRAAELNVGGFVKTNRNDGYVIFQCFQVGDADLLAEQIE
LDSLIFTRQMFAANELLKDLPEGDRVTPIVDALAKVHRAGELRVETPDTNEAKELSTFCR
KLTVPLRQALKRSGALLEKENPKRPIIHVCFVGPGTAYVGYSLSHNSSPYFMGIPRLKMA
SDAPSRSTLKLDEAFIHFIPKSEQEQRLRSGMNSVDLGACPGGWTYQLVRRGMFVAAVDN
GPMAQNLMDTGQVRHYQADGFRFEPPKKNIYWLVCDMVEKPSRVAELMEAWAINGWFKEA
IFNLKLPMKSRYKEVSTILATMQEVLRENGIDDFHLACKHLYHDRDEVTVHLWLKPSVGF
NFG

NT seq 1092 nt +upstreamnt +downstreamnt
atgataaacctatttttatattgccgtgccggctacgagaaagactgcgccgccgagatc
cagcagcgagccgcggagctgaatgttggcggctttgtaaagaccaatcgtaacgatggt
tacgtgatttttcagtgcttccaggtgggagatgccgatctgttggccgagcagatcgag
ctggactcgcttatcttcactcgtcagatgtttgccgccaatgagctgctcaaagatctg
cctgaaggcgatcgcgtcacgcccatcgtcgatgccctggctaaggtgcatagggcgggc
gagctcagggtcgagacgccagataccaacgaggccaaggagctgtcgaccttctgtcgt
aagttaaccgtgcccctgaggcaggcactgaaacgtagtggtgccctgcttgagaaggaa
aaccctaagcgtcctatcatacatgtctgtttcgtcgggccgggtaccgcctatgtgggc
tactccctgagccacaacagctcgccctatttcatggggatccccagactcaagatggcc
agcgatgcaccgagccgctcgactctcaagctggacgaggccttcatccacttcatccct
aagtcggagcaggagcagcgtctgcgcagcggcatgaactctgtggatctcggcgcctgt
ccgggtggctggacctatcaactggtgcgccgcggcatgtttgtggcggcggtggacaac
ggccccatggcgcaaaacctgatggacacggggcaggtgagacactatcaggccgacggc
ttccgtttcgaaccgcctaagaagaatatctactggctggtatgcgacatggttgagaag
ccttcacgagtggccgagctaatggaggcctgggcgatcaacggctggttcaaggaagcg
atatttaatctcaagttgccgatgaagagccgctataaagaggtatcgaccatcctggcg
accatgcaagaggtgctaagggaaaatggtatcgacgacttccacctagcctgtaagcat
ctgtaccacgacagagacgaggtgactgtgcatctctggctaaaacctagcgtcggtttt
aattttggttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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