KEGG   Shewanella loihica: Shew_2923
Entry
Shew_2923         CDS       T00489                                 
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
slo  Shewanella loihica
Brite
KEGG Orthology (KO) [BR:slo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:slo03016]
    Shew_2923
Enzymes [BR:slo01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     Shew_2923
Transfer RNA biogenesis [BR:slo03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    Shew_2923
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM Amdase
Other DBs
NCBI-ProteinID: ABO24789
UniProt: A3QH41
Position
3461443..3462867
AA seq 474 aa
MSKKLHIKTWGCQMNEYDSSKMADLLDEYQGYTLTEEAEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKNPNLIIGVGGCVASQEGKAIKDRAQCVDLIFGPQTLHRLPEMIEQIQQ
GGKAVIDVSFPEIEKFDRLPEPRAEGPSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPVDD
VILEIAQLAEQGVREVNLLGQNVNAYRGATHDDDICTFAELLRYVAAIDGIDRIRFTTSH
PIEFTQDIIDVYEDTPELVSFLHLPVQSGSDLILTQMKRGHMAIEYKSIIRRLRKARPDI
QISSDFIVGFPGESKQDFADTMKLIEDVQFDHSFSFIYSARPGTPASDLPDDVSLDEKKE
RLAILQDRITQQAMRYSRQMLGTVQRILVEGPSVKNPMELRGRTENNRVVNFEADPKHIG
SFVDVEIVDVFTNSLRGKFIRGEDEMDLRRDLRPSDILAKHKKDDDLGVTQFIP
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagtaagaaactccacattaaaacctggggctgtcagatgaatgagtatgactcatca
aagatggccgacctgctcgacgaatatcaaggctacaccttgaccgaagaggccgaggaa
gcagatgtactgctactcaatacctgctctattcgcgaaaaagcacaggaaaaagtattc
caccagctgggtcgctggaagacgctaaaagacaagaaccctaaccttatcataggtgta
ggtggttgcgtggcgtctcaagaaggtaaggcaatcaaagacagagctcagtgtgtcgac
ctgatcttcggcccacagacgctacatcgtctgccagagatgatcgaacagatccagcaa
ggcggcaaggccgtcatcgacgtcagcttccccgagattgagaagttcgaccgcctgcca
gagccgcgcgccgagggcccgagcgccttcgtctccatcatggaaggctgtagcaaatat
tgctctttctgcgtggtgccatacacacgcggtgaagaggtgagccgtccggtggacgac
gtgatcctagagatcgcccagctcgccgagcaaggcgtgcgtgaggttaacctgctaggc
cagaacgtgaacgcctatcgcggcgcgacccacgatgacgatatctgtaccttcgcagag
ctgctacgttatgtggccgccatcgacggtatcgatcgtattcgtttcactaccagccac
ccgatcgagtttacccaagacatcatagacgtgtatgaagacacgcctgagttggtgagc
ttcctgcatctgccggtgcaatctggttcagatctgatcctcacccagatgaagcgtggc
cacatggctatcgaatacaagtcgatcatccgtcgtctacgtaaggccagacccgacatt
cagatcagctctgacttcatcgtcggcttccctggcgagtctaagcaggactttgccgat
accatgaagctgattgaagatgtgcagttcgaccacagcttcagctttatctacagcgca
cgcccgggtacaccggcatcggatctacccgatgatgtctcgctggatgagaagaaggag
cgcctggcgattctgcaagacaggatcacccagcaggcgatgcgctacagccgtcagatg
ctaggcacagtgcagcgtatcctggtagaaggcccatcggttaagaaccctatggagctg
cgtggccgcaccgaaaacaaccgcgtggtgaacttcgaagccgatcctaagcacataggt
agcttcgtcgacgtcgagatcgtcgatgtgtttaccaactcgctgcgtggcaaattcatt
cgcggcgaagatgagatggacctgcgccgtgacctgcgtccatcagacatcctggccaag
cataagaaagatgacgatcttggggtgactcagtttatcccttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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