KEGG   Shewanella loihica: Shew_2934
Entry
Shew_2934         CDS       T00489                                 
Name
(GenBank) protein of unknown function DUF163
  KO
K00783  23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Organism
slo  Shewanella loihica
Brite
KEGG Orthology (KO) [BR:slo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slo03009]
    Shew_2934
Enzymes [BR:slo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.177  23S rRNA (pseudouridine1915-N3)-methyltransferase
     Shew_2934
Ribosome biogenesis [BR:slo03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Shew_2934
SSDB
Motif
Pfam: SPOUT_MTase
Other DBs
NCBI-ProteinID: ABO24800
UniProt: A3QH52
Position
3473240..3473710
AA seq 156 aa
MKLQLVAVGTRMPAWVTTGFEEYQRRFPRDMAFELIEIPAGKRGKNADIARILQKEGEQM
LAAIPKGNHIVSLDLPGKNWTTPELATQLNRWQLDGRDVSLLIGGPEGLAPACKQAANQS
WCLSALTLPHPLVRVLVAESLYRAWSINNNHPYHRE
NT seq 471 nt   +upstreamnt  +downstreamnt
atgaagttacaactcgttgccgtgggcactcgcatgcccgcctgggtcaccacaggtttc
gaagagtatcagcgccgtttccccagggacatggcgttcgaactgattgagatccctgcc
ggcaagcgcggtaagaatgccgacatcgcccgcatcttgcaaaaagagggcgaacagatg
ctggcggctatccctaagggaaaccatatcgtcagcctggatctgccgggtaaaaactgg
accacgcccgagcttgccactcagctcaatcgctggcaactggacggtcgcgatgttagc
ctgcttatcggcggccccgaggggctggcccccgcctgcaaacaggcggcgaatcaaagc
tggtgtttatcggccttgaccctgccccaccccttggtacgcgtcttggtggccgagagc
ctataccgtgcctggagcatcaacaacaaccacccgtatcatagagagtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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