KEGG   Shewanella loihica: Shew_3055
Entry
Shew_3055         CDS       T00489                                 
Name
(GenBank) CMP/dCMP deaminase, zinc-binding
  KO
K01493  dCMP deaminase [EC:3.5.4.12]
Organism
slo  Shewanella loihica
Pathway
slo00240  Pyrimidine metabolism
slo01100  Metabolic pathways
slo01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:slo00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    Shew_3055
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:slo02044]
    Shew_3055
Enzymes [BR:slo01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.12  dCMP deaminase
     Shew_3055
Secretion system [BR:slo02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   Shew_3055
SSDB
Motif
Pfam: dCMP_cyt_deam_1 MafB19-deam Bd3614-deam APOBEC3 APOBEC_N HVO_2753_ZBP SNAD4
Other DBs
NCBI-ProteinID: ABO24921
UniProt: A3QHH3
Position
3627443..3627892
AA seq 149 aa
MMSKWAIRFLQMAELVASWSKDPSTQVGAVITENNRIVSLGFNGYPHGISDSAETDNREM
KLLKTLHAEENAILYAKRDLSSCEIWVTHFPCPNCAAKIIQTGLKVVHSPQPSDDFLSRW
GDKIKVSQDMFDQAGVEVDWMQVESAPTE
NT seq 450 nt   +upstreamnt  +downstreamnt
atgatgagcaaatgggcgatacgttttttacaaatggccgaactggtagcctcatggagt
aaagacccctccacccaagtaggcgccgtgatcactgaaaacaaccgcattgtctcactg
ggattcaacggctacccgcacgggatctccgacagcgccgagacagacaaccgcgagatg
aaactgctcaaaacactgcacgccgaagagaacgccattctctacgccaagcgggatctc
agcagctgcgagatctgggtgacccactttccttgccccaactgcgccgccaagatcatc
cagactgggctaaaggtggtccacagcccacaacccagcgacgacttcctctcccgctgg
ggcgacaagatcaaagtcagccaggatatgtttgaccaggcaggcgtagaggtcgattgg
atgcaggtggagtcagcaccaacagagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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