KEGG   Serratia liquefaciens: M495_22000
Entry
M495_22000        CDS       T02740                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
slq  Serratia liquefaciens
Pathway
slq02020  Two-component system
slq02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:slq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    M495_22000
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    M495_22000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slq03021]
    M495_22000
Transcription machinery [BR:slq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     M495_22000
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AGQ33022
Position
4630989..4632422
AA seq 477 aa
MKQGLQLRFSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHEEIDAKE
TTETEGLDTREALEQKDMPEELPLDATWDEIYTAGTPSGTRTDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFSDTDAAIATSIVDAVDDTGYLTVPLEDILESMGDENVTMDEVEAVLK
RVQRFDPVGVAARDLRDCLLVQLSQYAQDTPYLAEARLIISEHLDLLANHDFRSLMRTTR
SKEDTLKEAMLLIQSLDPRPGQSINTGESEYVIPDVLVRKVQDVWTVELNSDSIPRLKIN
QQYAALGNSARNDSDGQYIRSNLQEAKWLIKSLESRNDTLLKVSRCIVEQQQAFFEQGAE
FMKPMVLADIAQAVEMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RAVVKKLIAAENPAKPLSDSKLATLLSDQGIIVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaggtttagccaacaactggccatgaccccccagctccag
caggccatacgcctgctgcagttgtccacgcttgagctccagcaggagatacagctggcg
ttagagagcaatccactgcttgaacagaccgatctgcacgaagaaatcgacgcgaaagag
acgaccgaaaccgaaggtttggatacccgggaggcgctggaacaaaaggacatgcccgaa
gagctgccgctggacgccacctgggacgagatctataccgccggaactccgtcaggaact
cgcaccgattacagtgacgacgaactgccggtgtatcagggtgaaaccacccaaaccctg
caggattacctgatgtggcaggtggatctgacgccgttttccgataccgatgctgccatt
gccacctcgatcgtcgacgccgtcgatgacaccggctatctcaccgtgccgctggaagac
attctggagagcatgggtgacgagaatgtgacaatggacgaagtcgaggcggtattgaaa
cgcgtacagcggtttgatccggttggcgtcgcggcgcgcgacctacgcgattgtctgctg
gttcagctctcccaatacgcccaagacacgccttacctggcggaagcgcgcctgatcatc
agcgaacatctggacttgctggctaaccacgactttcgcagcctgatgcgaacaacgcgc
tcaaaagaagatacactgaaagaagcgatgttgctgatccagtcactcgatccgcgtcca
ggccagtcgatcaacaccggcgaatctgagtacgtgatcccggacgtgctggtccgcaaa
gtgcaggatgtgtggacggtcgagctcaacagcgacagcatcccaaggctgaagatcaat
cagcagtatgctgcgctgggcaatagcgcgcgtaacgacagcgacggtcagtacatccgc
agcaatttgcaggaagcgaaatggctgatcaagagcctggaaagccgcaacgacaccctg
ctgaaagtttcgcgctgcatcgtcgagcagcagcaggcgttctttgagcaaggcgcggaa
tttatgaagcccatggtgctggcggatatcgctcaggccgtggagatgcatgaatcgaca
atctcacgcgtgaccacgcagaagtttttgcacagtccgcgcggcattttcgaattgaaa
tatttcttctcaagccacgtgaataccgacagcgggggcgaagcttcctctacggcgatc
cgggcggtggtgaagaaattgattgcggcggaaaaccccgccaaaccgctcagcgacagc
aagctggctaccctgctctccgatcaggggatcatcgtggcgcggcgtaccgtcgccaag
taccgagagtctttgtccatcccgccgtccaaccagcgtaaacagttggtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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