KEGG   Sideroxydans lithotrophicus: Slit_0458
Entry
Slit_0458         CDS       T01196                                 
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
slt  Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:slt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:slt03016]
    Slit_0458
Enzymes [BR:slt01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     Slit_0458
Transfer RNA biogenesis [BR:slt03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    Slit_0458
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM B12-binding ABC_tran_CTD
Other DBs
NCBI-ProteinID: ADE10699
UniProt: D5CM85
Position
465220..466560
AA seq 446 aa
MSQVLTKLHIKTYGCQMNEYDSDKMVDVLRACENMVQTDKPEEADIILFNTCSIREKAEE
KVFSDLGRARVLKQANPRLLIGVGGCVASQEGEAIIKRAPYVDVVFGPQTLHRLPQLIAA
RRESGKPQVDISFPEIEKFDHVPAAQTTHGTAFVSIMEGCSKYCTFCVVPYTRGEEMSRP
YADVMREVESLIAQGVGEITLLGQNVNAYQGETDDGDTVDFAFLLQTVAALPGVQRLRYT
TSHPREMSQRLIDLYATTPKLASHLHLPVQSGSDRILAAMKRGYTALEYKSIVRKLRAAR
PEISITSDFIVGFPGETDADFEATMKLIDDVAFDASFSFIFSARPGTPAAEMADDTPYET
KLARLHRLQARIAELGQQVSEAMSGTVQRVVVENISRKSEHELAGRTANNRVVNFVGSPG
MLGRYVDVRILSGTLHTLRGELVMEP
NT seq 1341 nt   +upstreamnt  +downstreamnt
gtgtcgcaagtgttgaccaaactccacatcaagacctatggctgccagatgaacgagtac
gactcggacaagatggtagatgtgttgcgcgcctgcgaaaacatggtgcagaccgacaag
ccggaagaggcggacatcattctgttcaacacctgttccattcgcgagaaggcggaagag
aaagtgttctccgacctgggccgtgcgcgcgtcctcaagcaggccaatcctcgattgctg
atcggtgtcggcggttgtgtggcaagccaggaaggcgaggccatcatcaagcgtgcacct
tatgtcgatgtggtgttcggcccgcagaccctgcaccgcctgccgcagctcatcgcggcg
cggcgcgagagcggcaagccgcaagtggacatcagctttcccgagatcgagaaattcgac
cacgtgccggctgcgcagaccacccacggcacggctttcgtctccatcatggaaggctgc
agcaaatactgtacgttctgcgtggtgccctacacgcgcggcgaagagatgtcgcgccct
tacgccgatgtgatgcgcgaagtggagagcctgattgcgcagggggtgggcgagatcacg
ctgctggggcagaacgtgaatgcctatcagggcgagacggatgacggcgacacggtggat
tttgcattcctgctgcagaccgtcgctgcgctgccaggcgtgcagcgtctgcgttatacc
acttcgcatccgcgcgaaatgtcgcaacggctgatcgatctgtatgcgaccacgccgaag
ctggccagtcacttgcatctgccggtgcagtccggttcggatcgaatcctggccgcgatg
aaacgcggctataccgcgctggaatacaaatccatcgtacgcaagctgcgtgccgcgaga
ccggaaatctccatcacctcggatttcatcgtcggctttcctggcgagaccgatgccgat
tttgaagcgaccatgaagctcatcgacgatgtcgccttcgacgccagtttcagcttcatc
ttcagcgcgcgtcccggcacgccggcagccgagatggcggacgacacgccatatgagacc
aagcttgcgcgcctgcatcgtctgcaggcgcgtatcgccgagttggggcagcaggtcagc
gaggcaatgtccggtacagtgcagcgcgtcgtggtggagaacatctcgcgcaagagtgag
cacgaattggcaggccgtaccgcgaacaaccgggtggtgaatttcgtcggctcgcccggc
atgctggggcgttatgtcgatgtgcggatactgtcgggaacattgcacacgctgcgcggt
gaactggtaatggaaccatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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