KEGG   Sideroxydans lithotrophicus: Slit_1284
Entry
Slit_1284         CDS       T01196                                 
Name
(GenBank) DNA repair protein RecO
  KO
K03584  DNA repair protein RecO (recombination protein O)
Organism
slt  Sideroxydans lithotrophicus
Pathway
slt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:slt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Slit_1284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slt03400]
    Slit_1284
DNA repair and recombination proteins [BR:slt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Slit_1284
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Slit_1284
SSDB
Motif
Pfam: RecO_C RecO_N
Other DBs
NCBI-ProteinID: ADE11521
UniProt: D5CRD5
Position
1272393..1273124
AA seq 243 aa
MSNAASKQRIQDEPAFVLHSYPFRETSLILEVFSRRHGRVALVARGARRPRSALRGLLMG
FQPLQMSWFGKHELRTLHSAEWQGGQPQLQGTALLCGFYLNELLLNLMARDDPHESLFDY
YLQTLQRLAQEDDHAFTLRCFEKHMLQELGYALLLENEADSGSPIVPTRNYRYILERGAI
AEMADSSQGMPVSGKTLLDMAADDYRDANSARQSKQLMRMLLDHHLAGKPLHTRELMRDL
QKL
NT seq 732 nt   +upstreamnt  +downstreamnt
atgagtaacgcggcatccaaacaacgcattcaggacgaaccggccttcgtactgcacagc
tatccattccgcgagaccagcctgatactggaggtgttcagccgtcggcacggacgtgtc
gcgctggtggcgcgcggggcgcggcgtcccaggtcggcgttgcgcggcctgttgatgggc
ttccagcctttgcagatgagctggttcggcaaacacgaattgcgtaccttgcatagcgcc
gaatggcagggcgggcagccacagctgcaaggaacagcgctgctgtgcggtttctatctg
aacgagttattgctcaacctgatggcgcgagacgatccgcatgagagcctgttcgactat
tatctgcaaacgttgcagcgtctggcgcaggaagacgatcatgcattcacgctgcgctgc
ttcgaaaagcacatgctgcaagaactgggatatgcgctgcttctggagaatgaagctgac
agcggcagccccattgtgccgacgcggaattaccgctatatacttgagcgcggtgcgata
gcggaaatggcggattcttcgcaaggaatgccagtatcgggcaagacgttgctggatatg
gctgcggacgattatcgcgatgccaacagtgcgcgccagagcaaacaattgatgcgcatg
ctgctggatcaccatcttgccgggaaaccgttgcacacacgcgaactgatgagggacttg
caaaaactatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system