KEGG   Sideroxydans lithotrophicus: Slit_2974
Entry
Slit_2974         CDS       T01196                                 
Name
(GenBank) pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
slt  Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:slt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slt03009]
    Slit_2974
   03016 Transfer RNA biogenesis [BR:slt03016]
    Slit_2974
Enzymes [BR:slt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     Slit_2974
    5.4.99.29  23S rRNA pseudouridine746 synthase
     Slit_2974
Ribosome biogenesis [BR:slt03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Slit_2974
Transfer RNA biogenesis [BR:slt03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    Slit_2974
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ADE13199
UniProt: D5CQH8
Position
2981140..2981766
AA seq 208 aa
MSSNNAIELIYQDDYLLLVNKPAGLLAVPGRGADKQDCLSARLQLQFPDALVVHRLDMAT
SGLMVFARGARMQSRLSNMFRDREVGKRYVAVVAGRLEPETGEVDLPIAADWPKRPLRKI
DSELGKPSLTRYRLLELDVSASRVELEPFTGRTHQLRVHMAAIGHPILGDALYGDESSAP
RLLLHASWLSFAHPFSSEPLNFVSAAPF
NT seq 627 nt   +upstreamnt  +downstreamnt
atgagcagcaataacgctatcgagctgatctatcaggatgactatctgctgctggtgaac
aaacccgccggtttgctggccgtgcccggtcgtggcgcggacaagcaggattgcctttcc
gcgcgcctgcaactgcaattccccgatgcgctggtggttcatcgcctggatatggctact
tccggcctgatggttttcgcgcgcggcgccaggatgcaaagccgcctgtcgaacatgttc
cgtgaccgcgaggtgggaaagcgctatgtcgcggtggttgctggcaggctagagccagaa
actggcgaggtcgacctgccaattgccgccgattggccgaagcggccgctgcgcaagatc
gactccgagttgggcaagccctcgcttacacgctatcgcctgctggaactcgatgtttct
gccagtcgcgtcgaactggaaccctttaccggccgtacccatcaactacgcgtacacatg
gcagccatcggccatcctatccttggtgacgcgctgtatggcgatgaatccagtgcgccg
cgtttgctgttgcatgccagttggctgagctttgcccacccttttagcagtgaaccattg
aactttgtttctgcggccccattctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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