KEGG   Streptococcus lutetiensis: KE3_0046
Entry
KE3_0046          CDS       T02775                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
slu  Streptococcus lutetiensis
Pathway
slu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:slu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KE3_0046
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slu03021]
    KE3_0046
   03400 DNA repair and recombination proteins [BR:slu03400]
    KE3_0046
Enzymes [BR:slu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     KE3_0046
Transcription machinery [BR:slu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     KE3_0046
DNA repair and recombination proteins [BR:slu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      KE3_0046
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Peptidase_M23 NusG_add
Other DBs
NCBI-ProteinID: AGS04637
UniProt: S5QUU1
Position
39879..43526
AA seq 1215 aa
MFSSYEENCGYDGVYRPLYFNEGVKNLAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQT
DSFKDFLDNGLREVFEDVLPITNFTDTMELEFVGYELKEPKYTLEEARIHDASYSAPIFV
TFRLINKETGEIKTQEVFFGDFPIMTEMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNG
KVGYGSTVIPNRGAWLELETDSKDIAYTRIDRTRKIPFTTLVRALGFSGDDEIMDIFGDS
ELVRNTIEKDIHKNPADSRTDEALKEIYERLRPGEPKTADSSRSLLVARFFDPRRYDLAA
VGRYKINKKLNIKTRLLNQTIAENLVDAETGEILVEAGTVMTHDVIDSIADQLDGDLNKF
VYTPNDYAVVTEPVVLQKFKVVSPVDPDRVVTIVGNANPDDKARALTPADILAEMSYFLN
LAEGLGKVDDIDHLGNRRIRAVGELLANQFRIGLARMERNVRERMSVQDNEVLTPQQIIN
IRPVTAAVKEFFGSSQLSQFMDQHNPLSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTH
YGRMCPIETPEGPNIGLINNLSTYGHLNKYGFIQTPYRKVDRATGVVTNEIVWLTADEED
EYTVAQANSKLNEDGTFAEDIVMGRHQGNNQEFPSNIVDFVDVSPKQVVAVATACIPFLE
NDDSNRALMGANMQRQAVPLIDPHAPYVGTGMEYQAAHDSGAAVIAKHDGRVVFSDAEKV
EVRREDGSLDVYHITKFRRSNSGTAYNQHTLVKVGDIVEKGDFIADGPSMEKGEMALGQN
PIVAYMTWDGYNYEDAIILSERLVKEDVYTSVHLEEFESETRDTKLGPEEITREIPNVGE
EALKDLDEMGIIRIGAEVKEGDILVGKVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLR
VPHGGDGVVRDVKIFTRANGDELQSGVNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRV
VPVEDMPYLPDGTPVDIMLNPLGVPSRMNIGQVMELHLGMAARNLGIHIATPVFDGATSE
DLWDTVNEAGMASDAKTVLYDGRTGEPFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSL
VTQQPLGGKAQFGGQRFGEMEVWALEAYGASNVLQEILTYKSDDVTGRLKAYEAITKGKP
IPKPGVPESFRVLVKELQSLGLDMRVLDEDDNEVELRDLDEGEDDDVMHVDDLEKARQKQ
ETEEDEKAEVSAEEK
NT seq 3648 nt   +upstreamnt  +downstreamnt
ttgttctcgtcgtatgaagagaattgtggttatgatggagtttatagacctctgtatttt
aatgaaggagtaaaaaacttggcaggacatgaagttcagtacgggaaacaccgtacacgt
cgtagcttttcaagaatcaaggaagttcttgatttacctaacttgattgaaattcaaacg
gattcttttaaagacttcttggataacggattaagagaagtttttgaagatgtacttcca
attacaaactttacggatactatggaacttgaatttgttggttacgaattgaaagagcct
aagtatacgcttgaagaagctcgtatccacgatgcatcttactcagcacctatttttgta
accttccgtttgattaacaaagaaacaggagaaatcaaaactcaagaagttttcttcggt
gatttcccaattatgactgaaatgggtacattcatcatcaacggtggtgaacgtattatc
gtttctcagttggttcgttctcctggtgtttatttcaacgataaagttgataaaaacggt
aaagttggttacggttcaactgtaatccctaaccgtggagcatggcttgaattagaaaca
gattcaaaagacattgcttacacacgtatcgaccgtacacgtaaaattccatttacaaca
cttgtacgtgctcttggtttctcaggtgatgatgaaatcatggatatcttcggtgatagc
gaacttgttcgtaacactatcgaaaaagatattcataaaaacccagcagattcacgtact
gacgaagcacttaaagaaatttacgaacgccttcgtccaggtgaaccaaaaacagctgat
agctcacgtagcttgcttgtcgctcgtttctttgacccacgtcgttatgacttggcagct
gttggtcgttacaaaatcaacaaaaaacttaacatcaagactcgtctcttgaaccaaaca
attgctgaaaacttggttgatgctgaaacaggtgaaatccttgttgaagctggtacagta
atgacacatgacgttatcgattcaattgctgatcaattggatggtgaccttaacaaattt
gtttacacaccaaacgattacgctgttgtcactgaacctgttgttcttcaaaaattcaaa
gttgtatcaccagttgatccagaccgcgttgttacaatcgttggtaatgcaaatcctgat
gataaagcacgtgcgcttacaccagctgatatcttggctgaaatgtcgtacttccttaac
cttgctgaaggtctaggtaaagttgatgatatcgaccacttgggtaaccgtcgtatccgt
gccgttggtgaattgcttgctaaccaattccgtattggtcttgctcgtatggaacgtaac
gttcgcgaacgtatgtcagtacaagataacgaagtgttgacaccacaacaaatcatcaac
atccgtcctgtaactgcagccgttaaagaattcttcggttcttctcaattgtcacagttc
atggaccaacacaacccgctttctgagttgtctcacaaacgtcgtttgtcagccttagga
cctggtggtttgactcgtgaccgtgctggttatgaagttcgtgacgtgcactacactcac
tatggtcgtatgtgtccgattgaaactcctgaaggacctaacatcggtttgatcaataac
ctgtcaacatacggacaccttaacaaatatggtttcatccaaacaccatatcgtaaagtt
gaccgcgctacaggtgtggttacaaacgaaatcgtttggttgactgccgatgaagaagat
gaatacacagtagcacaggctaactcaaaactaaacgaagatggaacatttgctgaagac
atcgttatgggtcgtcatcaaggtaataaccaagagttcccatcaaacatcgttgacttc
gttgacgtttcacctaaacaagtagttgccgttgcgacagcatgtattcctttccttgaa
aacgatgactctaaccgtgctctcatgggtgccaacatgcaacgtcaagcggtgccattg
atcgatccacacgcaccatatgttggtactggtatggaatatcaagcagcccacgattca
ggtgctgccgtcatcgctaaacacgatggacgagttgtcttctctgacgctgaaaaagtt
gaagttcgtcgtgaagatggttcacttgatgtttaccacatcactaaattccgtcgttct
aactcaggtacagcttataaccaacacacacttgttaaagttggcgatatcgttgaaaaa
ggtgacttcatcgctgatggtccttcaatggaaaaaggtgaaatggcccttggtcaaaac
ccaatcgtcgcttatatgacttgggatggttataactatgaagatgccatcatcttgagt
gaacgtcttgttaaagaagatgtttatacatcggttcacttggaagaatttgaatcagaa
acacgtgatactaagttaggccctgaagaaatcactcgcgaaattccaaacgttggtgaa
gaagctcttaaagaccttgacgaaatgggtatcattcgtattggtgctgaagttaaagaa
ggtgacatccttgtaggtaaagtaacacctaaaggtgaaaaagacctttctgctgaagaa
cgtcttcttcacgcaatcttcggtgataaatctcgtgaagttcgtgatacatcacttcgt
gtaccacacggtggagatggtgtcgttcgtgacgttaaaatctttacacgtgcaaacggt
gatgaattgcaatcaggtgttaacatgctcgttcgtgtttacatcgcacaaaaacgtaaa
atcaaagtcggagataaaatggccggtcgtcatggtaacaaaggggttgtttctcgtgtt
gttccagttgaagacatgccttaccttccagacggaactccagtcgatatcatgttgaac
ccacttggggtgccatctcgtatgaacatcggacaagttatggaacttcaccttggtatg
gctgctcgtaaccttggtatccacattgcaacaccggtcttcgacggggcaacttcagaa
gatctttgggatacagttaacgaagctggtatggctagcgacgctaagacagttctttac
gatggacgtactggtgaaccatttgataaccgtgtatcagttggcgtcatgtacatgatc
aaacttcaccacatggttgatgataaactccacgcacgttcagttggtccttactcactc
gttacacaacagcctcttggtggtaaagcacaatttggtggacaacgtttcggtgaaatg
gaagtttgggctttggaagcttacggtgcatcaaacgtccttcaagaaatcttgacttac
aagtcagatgatgtgactggtcgtcttaaagcttatgaagccatcactaaaggtaaacca
attccaaaaccaggtgtgccagaatcattccgagttcttgttaaagaattgcaatcactt
ggtcttgacatgcgcgtacttgacgaagatgacaacgaagttgaacttcgagaccttgat
gaaggtgaagatgacgacgtaatgcacgttgatgatcttgaaaaagctcgtcaaaaacaa
gaaacagaagaagatgaaaaagctgaagtttctgcagaagaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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