KEGG T06880: H9L13

Sphingomonas lutea: H9L13_05870

Entry

H9L13_05870       CDS       T06880

Name

(GenBank) CCA tRNA nucleotidyltransferase

K00970

poly(A) polymerase [EC:2.7.7.19]

Organism

slut Sphingomonas lutea

Pathway

slut03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:slut00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H9L13_05870
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slut03019]
    H9L13_05870
Enzymes [BR:slut01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     H9L13_05870
Messenger RNA biogenesis [BR:slut03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     H9L13_05870

SSDB

Motif

Pfam:

PolyA_pol PolyA_pol_RNAbd

Other DBs

NCBI-ProteinID:

QNN68388

UniProt:

A0A7G9SKL3

Position

complement(1142694..1143887)

AA seq 397 aa
MTLDAAKWRKRRGMQRLFDALGADEGLTRFVGGAVRDDLLGLPVSDVDLATRLKPEEVVA
RLEAARIKAVPTGIAHGTVTAVSDGHPVEITTLRRDVSTDGRRATVAFTDDWKEDAARRD
FTINALSADPLTGQIHDYFGGLDDLKARRIRFIGDPLQRIAEDHLRILRFFRFHARFGAT
EPDGPALDACTARANDLMALSRERIADELMKLLGLPNPAPTLAIMLDRAILRPVLPEIDP
ARIADLRALIAAEQSAAVVPDALRRLAALLPRDPGLADKIGGRLRLSNKARKRLVCAAER
DLGSAPRVLAYRVGSDCAIDRLLLAGDSAAAASLAGWKAPRLPTSGGALIARGLREGPLV
ATTLKQIEERWIEAGFPTGALFAEIVDSEVAAALSKP

NT seq 1194 nt +upstreamnt +downstreamnt
atgacgctcgacgccgccaaatggcgcaagcgccgcggcatgcagcgcctgttcgacgcg
ctcggggccgatgaggggctgacgcgcttcgttggcggcgcggtgcgggacgacctgctc
ggcctgccggtcagcgatgtcgatctcgccacgcgcctaaagcccgaggaggtcgtggcc
cggctcgaggcggcgcgcatcaaggccgtgccgaccggcatcgcccacggcaccgttacc
gccgtcagcgacgggcacccggtcgagatcaccacgctgcgccgcgacgtttccaccgac
ggccgccgcgcgacggtcgccttcaccgacgattggaaggaggacgcggcgcggcgcgac
ttcaccatcaacgcgctctcggccgatccgctgacgggccagatccacgattatttcggt
gggctcgacgatctcaaggcgcgccgcatccgcttcatcggcgatcccttgcagcgcatt
gccgaggatcatttgcgaatcctgcgcttctttcgcttccatgcccgctttggcgcgacc
gagcccgacggccccgcgctcgacgcctgcaccgcgcgcgccaacgatctgatggcgctg
tcacgggaacggatcgccgacgaactcatgaaattgctgggattgcccaatcccgcgcca
acgcttgcaatcatgctcgaccgcgcgatcctgcgcccggtgctgcccgagatcgacccc
gcgcgcattgccgatctgcgggcgctgatcgcggccgagcaatcggctgcggtcgtaccc
gatgcgcttcgccggctcgcggcgttgctgccgcgcgatcctggcttggccgacaagatc
ggcggccggctgcgactgtccaacaaggcgcgaaagcgcctcgtttgcgccgccgagcgc
gacctcggctccgcgccgcgcgtgctggcgtaccgagtgggcagcgattgcgcgatcgac
cggttgctgcttgcaggcgatagtgccgcagcagcgtcgctggccggctggaaggcgccg
cggctgccgaccagcggaggcgcgttgatcgcgcgcggccttcgcgaaggtccgctggtg
gcgacgacgctgaagcagattgaggaacggtggatcgaggccggattcccgaccggcgcg
ctgttcgcggaaatcgtcgattcggaagtcgctgcggcgctgtccaagccttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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