KEGG T03222: SLIV

Streptomyces lividans: SLIV_27340

Entry

SLIV_27340        CDS       T03222

Name

(GenBank) putative RNA pseudouridine synthase

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

slv Streptomyces lividans

Brite

KEGG Orthology (KO) [BR:slv00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slv03009]
    SLIV_27340
Enzymes [BR:slv01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     SLIV_27340
Ribosome biogenesis [BR:slv03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SLIV_27340

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

AIJ16379

Position

6117143..6118147

AA seq 334 aa
MSTGTGRAFGSVRSVRHTRRVSTIPEIRTLPVPDGLEGERVDAAISRMFGFSRTKAAELA
AAGKVQVDGSVVGKSERVHGGAWLEVEMPQAPAPVQVVAEPVEGMEIVHDDEDVVVVVKP
VGVAAHPSPGWSGPTVIGGLAAAGYRVSTSGAAERQGIVHRLDVGTSGLMAVAKSERAYT
SLKRQFKERTVDKRYHTLVQGHPDPTSGTIDAPIGRHPQHDYKWAVTAEGKPSVTHYDLI
EAFRAASLLDVKLETGRTHQIRVHMAAHRHPCVGDLTYGADPTLAKRLRLTRQWLHAVRL
GFEHPGTGDWVEYASEYPDDLQQALDLVREETYG

NT seq 1005 nt +upstreamnt +downstreamnt
ttgtccacagggaccgggcgcgcgttcgggagtgtccggtccgtccggcatactcgacgg
gtgagcacgattcccgagatccgtaccctgcccgtgccggacggcctggagggcgagcgc
gtcgacgccgccatctcccgcatgttcggcttctcccgtaccaaggccgcggagctcgcc
gcggcgggcaaggtgcaggtcgacggatcggtggtcggcaagtccgagcgcgtccacggc
ggtgcctggctcgaggtcgagatgccgcaggcgcccgctcccgtgcaggtggtcgccgag
cccgtcgagggcatggagatcgtgcacgacgacgaggacgtggtcgtcgtcgtcaagccg
gtgggcgtcgcggcgcatccgtcgccggggtggagcgggccgaccgtcatcggcggactg
gccgccgccgggtaccgcgtctccacctccggcgccgccgagcgccagggcatcgtgcac
cgcctcgacgtcggcacctccggtctgatggcggtggccaagtcggagcgcgcctacacc
tcgctcaagcgccagttcaaggagcgcacggtcgacaagcgctaccacacgctcgtacag
ggccaccccgacccgaccagcggcaccatcgacgcccccatcggccgccacccgcagcac
gactacaagtgggccgtcaccgccgagggcaagccctccgtcacgcactacgacctcatc
gaggccttccgcgccgcctccctgctcgacgtgaagctggagaccggccgcacccaccag
atccgcgtccacatggcagcccaccgccacccctgcgtcggcgacctgacctacggcgcg
gaccccaccctcgccaagcggctgcggctgacccgccagtggctgcacgccgtgcggctc
ggcttcgagcaccccggcaccggcgactgggtggagtacgccagcgaatatcccgacgac
ctccagcaggccctcgacctggtgcgcgaggagacctacggatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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