KEGG   Solanum lycopersicum (tomato): 100125910
Entry
100125910         CDS       T02665                                 
Symbol
MLH1
Name
(RefSeq) MLH1 protein
  KO
K08734  DNA mismatch repair protein MLH1
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    100125910 (MLH1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sly03400]
    100125910 (MLH1)
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     100125910 (MLH1)
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 100125910
NCBI-ProteinID: NP_001234641
UniProt: A5H619 A0A097PJP2
Position
4:complement(35248687..35288110)
AA seq 727 aa
MEDEAIPVPIPKEPPKIQRLEECVVNRIAAGEVIQRPVSAVKELIENSLDADSTSISVVV
KDGGLKLIQVSDDGHGIRYEDLPILCERYTTSKLSKFEDLQSIRSMGFRGEALASMTYVG
HVTVTTITMGQLHGYRATYRDGLMVDEPKACAAVKGTQIMIENLFYNMAARRKTLQNSAD
DYPKIVDIISRFGIHHTHVSFSCRKHGAGRADVHTIATSSRLDAIRSVYGASVARDLMNI
EVSDTGPLISVFKMDGFISNSNYIAKKTTMVLFINDRLIDCGALKRAIEIVYTATLPKAS
KPFIYMSIILPPEHVDVNIHPTKREVSFLNQEFVIEKIQSVVGSKLRSSNESRTFQEQTM
DLSSSGPMATSKDSTKESSPSGIKSQKVPHKMVRTDTLDPSGRLHAYMQMKPPGNSERGP
CFSSVRSSIRQRRNPSDTADLTSIQELVNEIDNDCHPGLLDIVRNCTYTGMADEIFALLQ
HNTHLYLVNVINLSKELMYQQVLRRFAHFNAIQLSEPASLPELVMLALKEEGTDPEGNES
KELRGKIAEMNTELLKQKAGMLEEYFSIHIDSNGNMSSLPVILDQYTPDMDRIPEFILCL
GNDVDWEDEKICFQTIAAVLGNFYAMHPPLLPNPSGDGLKFYRKRVLSSGSEVTSIDNIE
NDTTEAEFDEELRLEAENAWAQREWSIQHVLFPSLRLFFKPPTSMVTNGTFVQVASLEKL
YRIFERC
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggaagacgaagccattccagtgccgattccgaaggagccaccgaagattcagcggctg
gaagaatgtgtggtgaacagaatagcggctggcgaagtcatccaaaggccagtctctgcc
gtgaaagagctcattgagaacagcctggatgctgattccacctctatttccgttgttgtt
aaggatggcggtcttaaacttatccaagtttccgacgatggccatggaatccgttatgaa
gatttgccaattttatgcgagaggtatactacgtccaagctgagtaaatttgaagatttg
cagtccattaggtcgatgggatttagaggagaagccttggctagcatgacatatgtgggt
cacgtcactgtcaccaccattactatgggccagttgcatggatacagggcaacatataga
gatggtttgatggtggatgagccaaaggcttgtgctgctgtcaagggtacccagataatg
attgaaaatttattttataacatggctgcacgaaggaaaacccttcaaaattctgccgat
gactatccaaaaattgttgacattattagtaggtttggaattcatcacacacatgtgagc
ttctcttgtagaaagcatggagctggtagagcagatgttcacactattgctacttcttca
aggctcgatgcaattagatccgtttatggagcttcagttgctcgagatctgatgaatatc
gaagtttctgatactggtccattaatttcagtttttaagatggatggtttcatctccaac
tctaattatattgcgaagaagacaacaatggtgctttttataaatgatagactcattgat
tgtggtgctttgaagagggcaattgaaatagtctatactgcaacattgcctaaagcatca
aaacctttcatatacatgtcaatcattttgccgcccgagcatgttgatgtgaatatacac
ccaacaaagagagaggtaagctttttgaatcaagagttcgtcattgagaagatccagtct
gtagtagggtcaaaattgagaagctccaatgagtcgaggacattccaggaacagactatg
gatttatcttcatctggtccaatggccacaagtaaagattccactaaagaatcgtctcct
tctgggataaagtcacaaaaagtgccacataaaatggtacgaacagatactttggaccct
tctggaaggctgcacgcttacatgcaaatgaagcctcctggtaattcagaaagaggtcct
tgctttagctctgtgaggtcttctatcagacaaaggaggaatcctagtgacaccgcagac
ctcactagcatccaagagctcgttaatgagattgataatgactgtcaccctggtctattg
gatattgttaggaattgcacatatactgggatggcggatgagatttttgctttgcttcaa
cacaatacacacctttatcttgttaatgtgattaacttgagtaaagagcttatgtatcag
caagttttacgtcggtttgcccatttcaatgcaattcaactgagtgaaccagcatcatta
cctgagttagtaatgcttgctctgaaagaagagggtacagatccagaaggcaatgaaagc
aaagagctaagaggaaagattgccgagatgaatacagaactgctcaagcaaaaggctgga
atgctagaggagtattttagtattcatatcgattcaaatggaaatatgtctagtcttcct
gttatactggatcagtacacacctgacatggaccgcatcccagaatttatactttgttta
ggaaatgatgttgactgggaggacgagaaaatttgttttcagacaattgctgctgtccta
ggaaatttttatgccatgcatccgccattattgcctaatccctcaggtgatggcttgaaa
ttctacagaaagagagtactttcaagtggttcagaagtaacttcaatagataacatagag
aatgataccacggaggctgaatttgacgaagaactacgtttggaggctgaaaatgcctgg
gctcaacgtgaatggtcaattcagcatgttctgtttccctccctcaggctcttcttcaag
ccccctacttccatggttacaaatggaacttttgttcaggttgcatcactggaaaagctc
tacagaattttcgagagatgttaa

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