KEGG   Solanum lycopersicum (tomato): 101244419
Entry
101244419         CDS       T02665                                 
Name
(RefSeq) zinc finger matrin-type protein 2
  KO
K12848  U4/U6.U5 tri-snRNP component SNU23
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101244419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sly03041]
    101244419
Spliceosome [BR:sly03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    101244419
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    101244419
SSDB
Motif
Pfam: zf-met zf-C2H2_jaz zf-U1 zf-C2H2 SNRNP27 DUF5810 DUF2000 Exonuc_VII_L Methyltransf_12
Other DBs
NCBI-GeneID: 101244419
NCBI-ProteinID: NP_001308381
UniProt: A0A3Q7ENM0
Position
1:90272291..90278544
AA seq 202 aa
MDQSSNHVVGVDNTSRKKFDREEILQRARERDEEEADGRKSKSKGPPVQRKPLKPRDYQV
DLESRLGKTQVVTPIAPLSQQAGYYCPVCECVVKDSANYLDHINGKKHQRALGMSMRVER
SSLEQVQQRFESLKKRKDPGSFTVQDFDERMLKQQQEEEERKRLRREKKKEKKKEKVSEE
EPEIDPDVAAMMGFGGFKTSKK
NT seq 609 nt   +upstreamnt  +downstreamnt
atggatcaatccagcaatcatgttgttggagttgataatacttctcgaaaaaagttcgac
agagaagagattttgcagcgtgctcgtgaacgcgatgaagaggaggctgatggtcggaaa
tcaaagtcaaaaggacctccagtgcagaggaagcccttgaaaccaagagattatcaagtg
gacctcgaatctcggttaggaaagactcaggtggttactccaattgcaccattaagtcag
caggctggatactattgcccagtatgtgaatgtgtagtgaaggattctgcaaactacttg
gaccatatcaacgggaagaagcatcaacgagctttgggtatgtctatgcgggtggagaga
tcctctctagagcaggtccaacaacgatttgaatcgcttaagaagcgcaaagatccagga
agctttactgtgcaagattttgatgagcgaatgttgaaacagcagcaggaagaggaagaa
aggaaacgtttacgtcgagaaaagaagaaagagaagaagaaagagaaggtctcagaagag
gaacctgaaatagaccctgatgttgcagctatgatgggattcggaggtttcaaaacttca
aaaaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (37)   

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