KEGG   Solanum lycopersicum (tomato): 101246007
Entry
101246007         CDS       T02665                                 
Symbol
RAD23d
Name
(RefSeq) ubiquitin receptor RAD23d
  KO
K10839  UV excision repair protein RAD23
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03420  Nucleotide excision repair
sly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101246007 (RAD23d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101246007 (RAD23d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:sly03051]
    101246007 (RAD23d)
   03400 DNA repair and recombination proteins [BR:sly03400]
    101246007 (RAD23d)
Proteasome [BR:sly03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    101246007 (RAD23d)
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      101246007 (RAD23d)
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD CUE Rad60-SLD_2 Dsc3_N TECR_N MmeI_C UBA_3
Other DBs
NCBI-GeneID: 101246007
NCBI-ProteinID: NP_001306078
UniProt: Q9STA6
Position
2:complement(49263893..49269453)
AA seq 389 aa
MKIFVKTLKGTHFEIEVKPEDSVADVKKNIESVQGQDVYPAAQQMLIHQGKVLKDTTTLE
ENKVAENSFVVIMLSKNKVSSTGTSSISAALSNTAQPDGSTDQARQTITTPQATAALPQS
ASESAPTPAPVPAAASSVTDVYDQAASNLVAGSNLETTVQQILDMGGGSWDRDTVVRALR
AAYNNPERAVDYLYSGIPEQTEIPPVARAPAAPAVTAPASAQAINPAAQDASQLAVPSSG
PNANPLDLFPQGLTNAGSNAGAGNLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNP
HLMRLIQEHQPDFLRLINEPVEGEGNVLGQTAGAIPQAVTVTPEEREAIERLEAMGFDRA
LVLEVYFACNKNEELAANYLLDHLHEFDE
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgaagattttcgtgaagactttgaaaggcacgcactttgagatcgaagtgaaaccggaa
gatagcgttgcggatgtgaagaaaaacatagaatcagttcaggggcaagatgtctaccct
gctgcacaacagatgcttatccatcagggtaaagttctcaaggacactacgacgcttgag
gaaaacaaagttgctgaaaatagttttgtggtcattatgctttccaagaataaggtctca
tcaactggaacctcatctatatcagcagctctttcaaatacggcacaacctgacggttcc
actgaccaagctagacagacgataacaacacctcaagctactgctgcacttccacaatct
gcttctgagtctgctcctactcctgcccctgtgcctgctgctgctagttctgtaacagac
gtgtatgaccaagcagcatcaaaccttgttgctggaagtaacttggagaccacagttcaa
cagattcttgatatgggtgggggaagctgggatagggatacagttgtgcgtgctttgcgt
gcagcatataacaatccagagagagctgttgattacttgtattctggtattcctgaacaa
actgaaattccgcctgttgcccgtgcacctgctgctcctgccgttactgctcctgccagt
gctcaggctataaaccctgcagctcaggatgcttcacaactagcagttccttccagtgga
ccaaatgctaatcctctagatctgtttcctcagggcttaacaaatgctggttcaaatgcc
ggtgctggaaatttggattttctacgcaatagtccacagttccaggcccttagagcaatg
gtgcaagccaatccgcagatattgcagcctatgctccaggagttgggtaagcaaaatcca
catttgatgcggcttattcaagaacatcaaccggacttcctgcgcctcattaatgaacct
gttgaaggggaggggaatgtgttagggcagacagcaggtgcaataccacaagctgtgact
gttacacctgaagagcgggaggctattgaacgtcttgaagctatggggtttgatcgagct
ttagtattggaagtatacttcgcctgcaacaaaaatgaggagctggctgctaactatctg
ttagatcacttgcatgagtttgacgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (10)   
   Pfam (10)   
All databases (39)   

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