KEGG   Solanum lycopersicum (tomato): 101246287
Entry
101246287         CDS       T02665                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03083  Polycomb repressive complex
sly04120  Ubiquitin mediated proteolysis
sly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101246287
   04120 Ubiquitin mediated proteolysis
    101246287
  09126 Chromosome
   03083 Polycomb repressive complex
    101246287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    101246287
   04121 Ubiquitin system [BR:sly04121]
    101246287
   03036 Chromosome and associated proteins [BR:sly03036]
    101246287
Membrane trafficking [BR:sly04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    101246287
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     101246287
   Cul7 complex
     101246287
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     101246287
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     101246287
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 101246287
NCBI-ProteinID: XP_004248652
UniProt: A0A3Q7IHV2
Position
10:56989917..57007458
AA seq 150 aa
MIILRSFNGESFEVDETVALESETIKHMIEDDCANNTIPVPNVTGKILAKVIKYCKRHVE
VSKAEDNTAKEDLKTFDAEFVKVDQSTLFNLILAANYLKIKSLIDLTCQTLADMIKGKTP
EEIRNLLNIKNDFTPEEEEEIRRENAWAGW
NT seq 453 nt   +upstreamnt  +downstreamnt
atgatcattttgaggagcttcaacggagagagttttgaggtcgatgagacggtggcgcta
gaatcggagacgattaaacatatgattgaggatgactgcgctaacaacaccattcctgta
cccaacgttactggcaagatcttagccaaggtcatcaaatattgcaagcgccatgtggag
gtttctaaagctgaagataacactgctaaagaggatctgaagacttttgatgctgaattc
gtcaaagttgatcagagcacccttttcaatctcatactggctgccaactatttaaaaata
aagagcctgattgacctgacatgtcagacacttgctgacatgatcaaagggaagacccct
gaagagattcgtaacttacttaacatcaagaacgacttcactcctgaggaagaggaagaa
atcaggagggagaatgcttgggcaggctggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (39)   

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