KEGG   Solanum lycopersicum (tomato): 101246406
Entry
101246406         CDS       T02665                                 
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
  KO
K10772  AP endonuclease 2 [EC:3.1.11.2]
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sly03400]
    101246406
Enzymes [BR:sly01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     101246406
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     101246406
SSDB
Motif
Pfam: Exo_endo_phos zf-GRF
Other DBs
NCBI-GeneID: 101246406
NCBI-ProteinID: XP_010317694
Position
3:complement(5093892..5100434)
AA seq 576 aa
MKIVTYNVNGLRPRIQQHGSLLKLLDSLDADIICLQETKLSKNDIRADLVRAEGYESFFS
CCTRTSDRGRSSGYSGVATFCRVKSAFMSNEVALPISAEEGFTGLLATSKGYEPKEECAS
IAEGLECFSREELLKVDSEGRCLITDHGHFVLFNLYGPRAVQDDSERIQFKLTFFKMLER
RWECLMHQGRRIVIVGDLNIAPAAIDRCDAEPDFEKNVFRQWFRSLLVQNGGRLLDIFRA
KHPDRKGAYTCWSQSTGAEEFNYGSRIDHILSARSCLHGEEIQEGHDFVTCNVAECDILM
KFQRWKPGNTPRWKGGRSIKLEGSDHVPVYMSLVGIREVLQHSTPPLSTRYHPQVFGSQT
LVSMFTRRQTTEQVISEESEIPHIPSQEDFLSTPETYDSRAAQISVLGSQSNSNILPCIA
TKKKARLGQGSQLTLNSFFQKRTHRSETSSSSFADSKLCQTDISYSQIEPDGVPSSADES
GASKDCRSSAIDSNQHKCQLDACDSDKEKRKVALQEWQRIQQLMQNSVPLCKGHQEPCVP
RVVKKAGPNLGRRFYACARAEVCSSVSGLRYLEIPI
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgaagatagtgacgtacaacgtgaacggcttaaggccacgcatacagcaacacggttca
cttctcaaattgttggattcgcttgatgctgatattatctgtttacaggagactaaattg
tcgaagaatgatattcgagccgatttggttcgtgctgagggttatgagtctttcttctct
tgttgcactcgtacttctgatcgtggacgctcttctggatattccggtgttgctaccttt
tgtcgtgtaaaatctgcattcatgagcaatgaagtagctctgccaatttctgcagaagaa
ggcttcactggtctcctcgcaacatctaaaggatatgaacctaaggaggagtgcgcttca
atagcagaaggtctcgagtgtttttctagagaggagcttcttaaagttgatagtgaggga
cgttgtctgatcactgatcatggtcattttgttctattcaatttatatgggcccagagct
gttcaagatgactctgaaagaatccaatttaagctcacattttttaagatgttagagaga
agatgggagtgcctgatgcatcaaggaaggaggattgttattgtaggtgacctcaatatt
gctcctgctgccatagatcggtgcgacgcagaacctgattttgagaagaacgtgttcaga
caatggtttagatcattgctagtgcaaaacggagggcgtctccttgatatttttagagca
aagcatcctgataggaaaggagcctatacttgctggtcacagagtacaggagccgaggaa
tttaattatggttctaggattgatcacatacttagtgccagatcatgcttgcatggtgag
gaaattcaggaagggcatgactttgttacttgcaatgttgcagagtgtgacatattgatg
aaatttcaaaggtggaaacctggaaatacgccaaggtggaaaggagggaggagcatcaaa
ttagaaggttctgatcatgttccagtttacatgagtttagtaggaattcgtgaagtattg
cagcatagcaccccgccattatctaccagatatcatccccaggtctttgggagtcaaact
cttgtgtcaatgttcacgagaaggcaaacaactgagcaagttatttcagaggaaagtgaa
atccctcacattccaagtcaggaagactttctttcaactccagagacttatgatagtaga
gctgcgcagatttcggtgcttggctctcaaagcaactctaatattcttccctgcattgcg
accaagaagaaagcgaggcttggtcaggggtctcagctcacacttaactcattcttccag
aaacgcacacatagaagtgagacttctagcagcagctttgctgattctaaactttgtcag
acagacatctcttactctcagattgagcctgatggagtgccttcttctgctgatgaaagt
ggcgcttcaaaggactgcagatcaagtgcaattgacagtaatcaacataagtgccagcta
gatgcatgcgactcagataaagagaagaggaaagtggcattacaggagtggcaaaggatt
cagcaattgatgcagaatagtgtacctctttgtaagggccatcaagaaccttgtgttcct
cgggtcgttaaaaaagcagggcccaatttgggccgcagattttatgcttgtgctcgagct
gaggtatgctccagtgttagtggattgagatatttagaaataccaatttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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