KEGG   Solanum lycopersicum (tomato): 101249215
Entry
101249215         CDS       T02665                                 
Name
(RefSeq) diaminopimelate decarboxylase 1, chloroplastic
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly00300  Lysine biosynthesis
sly00470  D-Amino acid metabolism
sly01100  Metabolic pathways
sly01110  Biosynthesis of secondary metabolites
sly01230  Biosynthesis of amino acids
Module
sly_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sly00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    101249215
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    101249215
Enzymes [BR:sly01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     101249215
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-GeneID: 101249215
NCBI-ProteinID: XP_004230896
Position
1:complement(96602640..96608284)
AA seq 480 aa
MAATHLVSHSPSLHKSLKYPSNASQKLSFFKPNFPLKPISRNLSIRASVSTSEPQTQKFQ
HCFKKCEDGFLYCEGVKVEDVMETVERRPFYLYSKPQITRNVEAYKAALEGLDSIIGYAI
KANNNLKILEHLRSLGCGAVLVSGNELKLALGAGFDPTKCIFNGNGKLLEDLVLAAQAGV
FVNIDSEFDLDNIVAAARLAGKKVNVLLRINPDVDPQVHPYVATGNKSSKFGIRNEKLQW
FLDAVKAHPQELKLVGAHCHLGSTITKVDIFRDAAALMVNYIDEIRSQGFEIDYLNIGGG
LGIDYYHAGAILPSPRDLINTVRELVLSRNLNLIIEPGRSLIANTCCLVNRVTGVKTNGT
KNFIVIDGSMAELIRPSLYDAYQHIELVSPPPPEAAIAKFDVVGPVCESADFLGKDRELP
APSRGTGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSLSKIRHGETFEDHLRLFEGL
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggcggctacacaccttgtctcacactctccatcacttcacaagtccctcaaataccca
tcaaatgcatcacaaaaactttcttttttcaaacccaattttccgttgaagcccatttca
agaaaccttagcataagggcatctgtatcaacttctgagcctcaaactcagaaatttcag
cattgtttcaagaaatgtgaagatgggtttttgtattgtgagggtgttaaggttgaagat
gttatggagactgtcgaaagacgacccttttatttatatagtaagccccaaattactagg
aacgttgaggcttataaggccgctttagagggcttggattcaattattggttacgctatt
aaggccaacaataatctcaagattttggaacatttgaggagccttggttgtggagctgtt
ttggttagtgggaatgaactcaaattggcacttggtgctggatttgatcctaccaagtgt
atttttaatggaaatggaaagctgttagaggacctagtgctagctgcccaagcaggtgtg
tttgtaaacatcgacagtgaatttgacttggataacattgtagcagctgcaagactggct
gggaagaaagttaacgtgctactcaggattaatccagatgtagatccccaggttcatcct
tatgttgccactgggaataagagctccaaatttggcatcagaaatgagaagctgcaatgg
tttctagatgctgtcaaggcacatcctcaggaattgaaacttgttggagctcattgtcat
cttgggtcaactatcaccaaggtagacatttttcgagatgcagctgccttgatggtgaac
tacattgacgaaatccgatctcaaggatttgaaattgattacctgaatattggaggtggt
ttagggattgattactatcatgctggagctatccttccttcacctagagatcttattaat
acggtacgagaattagtcctttctcgaaacctcaatctcattattgaacctggaagatca
ctaattgcaaacacatgctgcttggttaacagagttactggagtgaaaaccaatgggacc
aagaactttattgtgattgatggtagtatggctgagcttatacgtccaagtctttatgat
gcttatcagcacatagagcttgtttcccctccacctccggaagctgcaattgctaagttt
gatgttgttggtcctgtatgtgagtcggctgatttcctggggaaggaccgtgaacttccc
gccccttctaggggcactggtttggtagttcacgatgcaggtgcttactgcatgagtatg
gcatcaacttacaatctcaaaatgcgcccaccagagtactgggtggaagaagatggatca
ctgtccaaaatccgtcatggggagacattcgaagaccatttaagattgtttgaaggtctg
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (5)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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