KEGG   Solanum lycopersicum (tomato): 101249347
Entry
101249347         CDS       T02665                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RKP isoform X1
  KO
K12169  Kip1 ubiquitination-promoting complex protein 1 [EC:2.3.2.27]
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101249347
Enzymes [BR:sly01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101249347
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101249347
  Multi subunit Ring-finger type E3
   KPC complex
    101249347
SSDB
Motif
Pfam: RKP_N SPRY zf-C3HC4_3 Ufd2P_core zf-RING_2 zf-RING_5 zf-C3HC4_2 zf-C3HC4
Other DBs
NCBI-GeneID: 101249347
NCBI-ProteinID: XP_010319777
Position
4:complement(51725946..51737063)
AA seq 1292 aa
MAEDGLRIGIGGLSSGLAVVLNGEDRKESSQKTHLVSYCDGFGDQSVERTLEHIFDLPYK
CIKSLSCSINTEVVRLVIKNEFLKYHINQKTVTDRKREGVLTAGGDGCKHQFIQLEESSI
CGDIRIVKQPLIMESHSLFSSARANACVWKGKWMYEVTLETSGIQQLGWATLSCPFTDHK
GVGDADDSYAYDGKRVSKWNKEAQDYGQPWVVGDVIGCCIDLDGDEISFYRNGVSLGVAF
IGIRKMVPGLGYYPAISLSQGERCELNFGEIPFRYPVKGFLPIQPPPTRSSIATDLLNCF
RRLIEMQRVGRAEFSSVEKLRRLKRFVSFEKLSHPVSRGICEELFSTLAAEDGSTKYISC
GPLLSLIMEVFRMHPPHDYMSLDSILDSLLEFPESRILFEHIISSLSTLCKTAPLSLTEN
CPYSGSYIYLALACHILRREEVMTLWWRSSDFDLLFEGFLSRKSPNKQDLQGLMPSIWWS
GSCEDVSNEASLLLTTGALSEIINKVEEKQRDLCRLVMQFMPPTSPPQLPGSVFKTFLQN
ILLKNRGADRDSPPPGVSSNSVLVSLFGIVLHFLSEGFGDICDWMKDSGTSDVGFLHRGG
QQAFPVGLFLKNDPHRVDIPRLGGSYNHLAKSHPISIEQHEEVIRWEEGCMDNVKDRVTH
LSKQKPCCCSTYDADFTRISKDSIRHMGKGSRGHCSSIRERSAHVAAECSTSSLNDDIAD
KPSTSDQSDSEFGFLPMQQMRYVPRENNVSSATLKEEELLDTMLLLYHLGLAPNFKQASL
YMNRQSQSISLLEETDKQIRENVNREHVKSLKEVRGVYREEVMDCVRHCAWYRISLFSRW
KQRGMYAACMWIVQLLLILSKDDSVFLYIPEYYLETLVDCFHVLRKSDPPFVPATIFLKQ
GLTSFVTFVVTHFNDPRISSVELRDLLLQSIYILVQYKEFLSELECNEAAMQRMPKALLS
TFDSRSWIPVTNILLRLCKGSGFGSSKRGESSSSSSVIYQKLLREVCLHDEELFSTFLNH
LFNTLSWAMTEFSVSVREMQESYKVLEFQQRKCSVIFDLSCNLARILEFCTHEIPQAFIS
GADTNLRRLTEVIVFILNHLISAADQELFDLCHSCSFVRRPGQPPEKPNRGMILAPLAGI
ILNLLEASGESDTRDNDMVGIFASMDCPDTVVSGFQYLLEYNWASLFRGDDYLEKIRQLE
IFSGLLICRSEVVEVERIAYGGETDYDDSICCICYTSQANAQFVPCSHVSCFGCISRHLL
NGERCFFCNATVLEVIKTDANADQGHFSNLEE
NT seq 3879 nt   +upstreamnt  +downstreamnt
atggcagaagacggcctacgtatagggataggtggcctttcttctgggttggctgtggta
ttgaatggtgaagataggaaggagagttctcagaaaactcatcttgtttcatattgtgat
ggttttggcgatcaatctgtggaaagaacccttgagcacatctttgatcttccatacaag
tgtattaagtcactctcttgttcaataaatactgaagtggttcgcttagttataaagaac
gaatttctgaagtaccacataaatcagaagactgttacagacagaaaacgagaaggggtt
ttgactgctggtggtgatggttgtaaacatcagtttattcaattagaggaatcaagcatc
tgtggtgatattcgaatagtcaaacagcctttgatcatggagagtcattctctattcagc
agtgctagggccaatgcttgtgtctggaaagggaaatggatgtatgaagtaactcttgaa
acttctggtatacaacagctaggctgggcgactctttcctgcccattcactgatcacaag
ggtgtgggtgatgctgatgattcatatgcatacgatggaaaaagggtcagtaaatggaat
aaggaagctcaggattatggtcagccatgggttgttggtgatgtgattggatgttgtata
gatttggatggtgatgagatatcattttatcgaaatggagtttcacttggtgtagcattt
attggtattcgtaagatggtacctggattgggatattatccagcaatttctctttctcaa
ggtgaacgttgtgagttaaactttggggaaatccctttcaggtacccagtaaaaggtttc
cttcccattcagcctccaccaaccagaagttcaattgctactgatctgcttaattgtttt
agaaggctaattgaaatgcagcgtgtgggaagggcagagttcagttctgttgagaaattg
cgaagattgaaaaggtttgtatcatttgaaaaactttcgcaccctgtctctcgtgggata
tgtgaggaattattctctacacttgctgctgaagacggaagcacaaagtatatatcttgt
ggtccacttctatcactgataatggaggtctttaggatgcatcctccacatgactatatg
agtttggacagcatacttgattctcttctagagtttccagagtcgagaattttgtttgaa
catatcataagttcgctgtcgactttatgcaaaacagcgccattgagccttacagaaaac
tgtccttactcaggttcatatatatatttggccttggcatgccacatcttaaggcgggaa
gaagtaatgacactgtggtggagatcttcagattttgacctcttatttgaagggtttttg
tcgcggaagagtcctaacaagcaggatcttcaaggtctgatgccttctatatggtggtct
ggttcgtgtgaggatgtgtcaaatgaggctagcctgttactgactacaggtgctttgtca
gaaataattaacaaggttgaagagaagcagagggacctctgccgcttggttatgcagttc
atgccacccacatcaccacctcagcttcctggatctgtattcaagacattcttacaaaac
attctacttaaaaacaggggtgcagatcgagattcgccaccacctggtgtttcaagcaat
tctgtacttgtttctttgtttggtatcgtactccatttcctctctgaggggttcggggac
atttgtgattggatgaaggactctggaacctctgatgttggttttctacacagaggaggc
cagcaagcttttcctgtaggcttgtttctcaagaatgatcctcatcgagttgatattcct
aggcttggtggttcatataatcacctagcaaaatcccatcctattagtattgagcagcat
gaggaagtgattcggtgggaagaagggtgtatggacaatgtaaaagatagggttacacat
ctaagtaagcagaagccgtgttgttgttctacttatgatgccgattttacaagaatatcc
aaagattctatcaggcacatgggaaaaggttcacggggacattgcagctctattcgtgaa
aggtctgctcatgttgctgcagaatgcagcaccagtagtttgaatgatgatattgcagat
aaaccaagcacgagtgatcagtcggattcagagtttggcttccttcctatgcagcaaatg
agatatgttcccagagagaacaatgtttcttcagcaacactaaaagaagaggagctactg
gataccatgcttttgctgtaccatttaggtcttgcacccaatttcaagcaggcatcattg
tatatgaatcggcaatcacagtctatctctcttctggaagaaactgataagcagatcaga
gaaaacgttaacagggagcatgtaaagagcctgaaggaggttcgtggtgtatatagagaa
gaagtaatggattgtgtcagacattgtgcttggtatcgtatttctctattttctcggtgg
aagcagagggggatgtatgcagcgtgcatgtggattgttcagttgcttttaattcttagc
aaagatgactcagtcttcctttatattcctgagtactatttggaaactttggtggactgc
ttccacgtacttcgtaaaagtgatcctccttttgtgcctgctacaatatttctcaagcaa
ggactcacatcctttgttacttttgttgtcacccacttcaatgatccaaggatatcgagt
gtggagttgcgagatcttcttctgcagtctatttatatcttggtgcagtacaaggagttc
ttgtctgaattagaatgtaatgaagccgcaatgcagagaatgcctaaagcactactatct
acttttgacagtagatcatggattcctgtaacaaatatacttctccgtttgtgcaaaggt
tcaggctttggatcatcaaaacgtggagaatcatcttcctcttcatcagttatatatcag
aaattattgcgagaggtttgcttgcatgatgaagaactattttctacctttctgaatcat
ttgttcaacactctgagttgggcaatgacggaattttcagtttcagttcgcgagatgcag
gaaagttacaaggtgttggagtttcagcaaaggaaatgcagtgtcatatttgatctatcc
tgcaatcttgcaaggattttagaattttgtacccatgagatacctcaagcgtttatctct
ggggcagatacaaatttgcgaaggctgactgaagtgatcgtctttatactaaaccactta
atttctgcagctgatcaagaactttttgacctttgtcattcttgcagtttcgtaagacgt
ccaggtcagcccccagagaaaccaaacagaggcatgattttggcaccccttgctggaatc
attcttaatttgctggaggctagcggggagtcggatactagagataatgacatggttggg
atttttgccagcatggactgccctgatactgtagtctctgggtttcagtatcttttggag
tacaattgggctagtttattcagaggagatgattatctggaaaaaatcaggcaactggag
atattttcaggtctgcttatctgtcgttcagaggtagtggaagttgagagaatagcctat
gggggtgaaacagattatgatgacagtatctgctgcatctgttatacgagtcaagcaaat
gctcaatttgtcccttgttcgcacgtttcttgcttcggctgcatttcaagacaccttctg
aacggtgagaggtgcttcttttgcaatgcaactgttctagaagttatcaagactgatgca
aatgcagatcaaggacatttctcaaatttggaagagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (68)   

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