KEGG   Solanum lycopersicum (tomato): 101251377
Entry
101251377         CDS       T02665                                 
Name
(RefSeq) cysteine--tRNA ligase 2, cytoplasmic isoform X2
  KO
K01883  cysteinyl-tRNA synthetase [EC:6.1.1.16]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    101251377
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sly01007]
    101251377
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sly03016]
    101251377
Enzymes [BR:sly01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.16  cysteine---tRNA ligase
     101251377
Amino acid related enzymes [BR:sly01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   101251377
Transfer RNA biogenesis [BR:sly03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    101251377
 Prokaryotic type
    101251377
SSDB
Motif
Pfam: tRNA-synt_1e tRNA-synt_1g tRNA-synt_1f tRNA-synt_1 Dicer_PBD DALR_2 THDPS_N GHMP_kinases_C DUF763
Other DBs
NCBI-GeneID: 101251377
NCBI-ProteinID: XP_004238918
Position
5:complement(3328947..3333971)
AA seq 564 aa
MANEKVEFQVYNSMTRQKEVFIPKEPGKVKMYVCGVTSYDYSHIGHARAYVAFDLLYRYL
KYLGYEVMYVRNFTDVDDKIIRRANELGEDPTALSGRYCQEFLKDMDDLQCLQPTHQPRV
TEHMEQIKEMIAKIMANGCAYTINGDVYFSVDSFPEYGRLSGRKLEDNRAGERVEVDSRK
KNPADFALWKSAKPGEPSWESPWGPGRPGWHIECSAMSAHYLTHSFDIHGGGMDLTFPHH
ENEIAQSCTACRESNISYWMHNGFVNIDDEKMSKSLGNFFTIREVTRLYHPLALRYFLLG
NHYRSPVNYSISQIEIASESVFYIYQTLLDSEETLSAFQQGTETAKNAKGRVTPQAQECI
NKLRNELKTKLSDDLHTPTILNAALQEALKQMNSCLTILKKKQQKQQHLSASLSLTELLK
EVKAVLDVLGLLAGSTSAEVLQQLKQRALKRAELTEEDVLHAIEERALARKNKDFARSDQ
IRTDLAAKGISLMDITGTTETAWRPCVRSIQEQPAAPAQPKKSAAAVQEKPVAPSQQKQP
SAAPQQEQPAAAPAQQDHTTVPPQ
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggcgaacgagaaggtggaatttcaagtgtacaattcaatgacgagacagaaggaagta
ttcataccgaaggaacctggcaaggtcaaaatgtacgtttgtggcgttacgagttacgat
tacagtcatatcggccatgctcgtgcctatgtcgccttcgaccttctctacagatatctg
aaatacttgggatatgaggttatgtatgtgcgcaacttcaccgatgtagacgacaagata
attcgtagggctaatgagcttggagaagatccaacagctctgagtggtcgatactgccaa
gagtttctaaaagacatggatgatctccagtgcctccaaccgactcatcagccacgtgtt
actgagcacatggagcagattaaggaaatgatagctaagattatggctaatggctgtgca
tacacaatcaatggagatgtttatttctctgttgatagttttccagagtatggtcgattg
tccggacgaaaattagaagataatcgagctggagaacgagttgaagttgattcaagaaag
aaaaatcctgccgactttgccttgtggaagtctgcaaagcctggtgaaccaagttgggag
agcccctggggtcctggaagaccaggttggcatatagaatgcagtgcaatgagtgcgcac
tacctgacacattcctttgatatacatggtggtggaatggacttgacttttcctcaccat
gaaaatgagattgcccagagttgcactgcttgccgagagagtaatattagctactggatg
cataatggttttgtgaacatagatgatgagaaaatgtcgaaatcattggggaatttcttc
actatacgtgaggttactcgattgtaccatccccttgcattgaggtacttcttgttgggg
aatcactaccgatctccggttaactattcaatatcacagatagaaattgcttcagaatct
gtgttctacatttatcagaccttactagattctgaagaaaccttgtcagctttccaacaa
ggaactgaaactgcaaaaaatgcaaaggggcgtgttacccctcaggcccaagaatgcatc
aataagctgcgtaatgagttgaagacaaagctctctgatgacttgcatacacctacaatt
ttaaatgctgctcttcaagaagcccttaaacaaatgaatagttgcttgaccatactgaag
aaaaagcagcaaaagcaacaacacttatctgcatctttgtccctgaccgagctcttgaaa
gaagtgaaggcagtattggatgttcttggcttgcttgctggttcaacttctgctgaggtt
ctgcagcaacttaaacagagggcattgaaaagggctgagttaacagaggaagatgttctg
catgcaatagaggaaagagcactagcaaggaaaaacaaagatttcgctagaagcgatcaa
atcagaactgatctagctgccaagggtatctctttaatggacattacagggacgaccgaa
acagcttggaggccttgtgtaagatccatacaagaacagcctgccgccccagctcaaccg
aaaaagtctgcagcagcagtacaagaaaagcctgttgcaccatctcaacaaaagcagccc
tctgcagcaccacaacaagaacagcccgctgctgcgccagctcaacaagatcatactacg
gtgccacctcagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (49)   

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