KEGG   Solanum lycopersicum (tomato): 101254121
Entry
101254121         CDS       T02665                                 
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
  KO
K11789  DDB1- and CUL4-associated factor 1 [EC:2.7.11.1]
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sly01001]
    101254121
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101254121
Enzymes [BR:sly01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     101254121
Protein kinases [BR:sly01001]
 Serine/threonine kinases: Other
  Other
   101254121
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101254121
SSDB
Motif
Pfam: LisH ANAPC4_WD40
Other DBs
NCBI-GeneID: 101254121
NCBI-ProteinID: XP_010325659
Position
8:complement(58607968..58621621)
AA seq 1970 aa
MEEEPQQQQSLAAEGEEERQTETVPTEEHEEEEGEEAGGGEEDEEEAESEGLIIKAQALM
EKITALPDNPNPNTIHALSSLFETQEASYMEENGHAAPNNGRSSHNVGRLGNLIRDNDEF
FELISSKFLTERRYSVSVKAAAARLLFSCSLTWMYPHVFEDPVLENLKSWTTDDTIRLSG
DDHYWKHESGDRRSSDSEMLKTYSTGLLAVCLASGGQVVEDVLTSGLPAKLMHYLRIRIL
GETTTSQRDATSLLDGKASSTGTGVRAREECRSRFRQVAESSHLDIPRVAEDGLHGDQIL
DKDRDRSASRHMHGDERWTDEEPPDSMAMDDDNCQADGDGEERWHIRDLRDGKAKPGNRS
VREDEYDESARDELSRRRVNRGWTRHRGRGRVTEGVPDNEAALTSPGSASRLSGQSRSRN
LNRNQELRRAPDNKKNLSRTNVDGFGMERDENDECFRECKVGSKDITDLVKKAVGAAETE
AKTANAPAEAVKAAGDAAAEVVKSAAFEEFKKSNDDEAAVLAASKAASTVIDAAIAVEVS
RSAISEGESQDIKATAQEANEDVDEFFILDSDSLAKLREKFCIQCLIILGEYVEVLGPVL
HEKGVDVCIGLLQRNSKHKEGCRLSLLLPDVLKLICALAAHRKFAAVFVDRGGMQKLLAA
PRAPQTFCGLSSCLFAIGSIQGIMERVCTLPSSIIHQVVELALQLLECPQDLARKNSALF
FAASFVFRAVVDAFDAQDGLQKMLNLLQDAALVRSGASSGALTASGSLRSDRSPPEVLTA
SEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKSVRSAGRNIPSVRAASKPLDISNEVMDA
VSRLIQKDRRLGPAAVRARWPVVDKFLNCNGHITMLELCQAPPVERYLHDLLQYALGVLH
IVTLVPYSRKLIVNATLSNDRVGIAVILDAANSAGYVEPEIVEAALNVLVCLVCPPPSIS
NKPSVSTQAQQTNAVQSANTPGVETRDRNADRSETRDRNAERILPDRAVNISSQNENRES
TLPDRGSTAVPGTSAVSGTSQGPVSTVTSGLVGDRRISLGAGAGCAGLAAQLEQCYRQAR
EAVRANNGIKVLLQLLQPRIVTPPAAIDCLRALACRVLLGLARDDTIAHILTKLQVGKKL
SELIRDSGNQTPGSEQNRWQAELAQVAIELIGVVTNSGRASSLAATDAATPTLRRIERAA
IAAATPITYHARELLLLIHEHLQASGLTDTATMLLKEAQLTPLPSLAAPSSLAHQTSGQE
TSSVQIQWPSGRAPRGFLSAKPKLPPLDEDGGLKSESIVCSSRRKPLAFSSARSLSSKSF
PVEVSPSTSGCKFSNSRKCATPIATSETPLLSTVKAGGDPDIMFKTPIVLPMKRKLTDLK
ESGSVSSVKRLNTGEHTVRSPVCVTPNSFRRSGLPSDTNVPSTPNSTLREIHNRPGSSAF
PTEGDDTPMLSSSQHGLLSDTQPSNAERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLH
PHVCPEPKRSLDAPSNVTSRLSTRDFRSLNGGTHGKRKDRQFVYSRFRPWRTCRDDAGVL
LTCVSFMGDSSQIAAGTHSGELKIFDTNSSSILESFTSHQAPLTLLQSYLSVETQLLLSS
SSHDVRLWDATSVSAGPKHSFEGCKAARFSNFGTTFAALSAEQSRREILLYDTQTCQVEL
KLTDTSNIPSGRGHMYSLAHFSPSDNMLLWNGVLWDTRGSGPIHRFDQFTDYGGGGFHPA
GNEVIINSEVWDLRNFRLLRSVPSLDQTVITFNASGDVIYAILRRNLEDVMSAFQTRRVK
HPLFAAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLVTMDDQDEMYSSARVYEIG
RRRPTEDDSDPDDAESEDEDEDDDDDIDEEAILGTDLDGDGESDADDLSNDDDSVSELDD
EEDEDGDFIVDGVDFGGGGILEIVTDGEDEDDSELVESFSSGDDDDDDLL
NT seq 5913 nt   +upstreamnt  +downstreamnt
atggaagaggagccgcaacaacaacaatcattggcggcggaaggggaggaggagcggcag
acggagacggttcctacggaggagcatgaggaggaagaaggagaagaagcgggaggtgga
gaggaagatgaagaagaggcggaaagtgaagggttgatcattaaggcacaagcgttgatg
gagaagattactgctttgcctgataaccctaaccccaatactatccatgctctttcttct
ctttttgaaacccaagaagctagttacatggaagagaatggtcatgctgctcctaataat
ggccgatcttcccataatgttggacggctagggaaccttatccgggacaatgatgaattc
tttgaactgatatcttcgaagttcctaactgagaggagatattcagtttctgtgaaggct
gctgctgcaaggctgctttttagctgttcactgacatggatgtatccacatgtttttgaa
gaccctgtgcttgaaaatttaaaaagctggacaacggacgacacaatcagattatctggt
gatgatcattattggaagcatgagtcaggtgatcggaggtcctccgattctgagatgctg
aagacctactctactggacttcttgctgtatgtttggcaagtggtggtcaagtagtcgaa
gatgtattaacatctgggctcccagcaaaactcatgcactatcttcggattagaatttta
ggggagaccaccacaagccaaagagatgcaacatctttgttggatggcaaagcatcatct
acaggtactggtgtgagagctagagaggaatgtagaagtagattccggcaagttgccgaa
agttctcatttagatatacccagagtagcggaagatggacttcatggtgatcaaattctg
gataaggatcgcgatagaagtgccagtaggcatatgcatggggatgaacgttggacagat
gaagagccacctgattctatggctatggatgatgataattgtcaggcagatggagatggc
gaagaaagatggcatattagagatttacgtgacggaaaggcaaagcctggtaacagatcc
gtaagggaagacgaatatgatgagagtgctagagatgagttgtcaagacgcagggtgaat
cgtgggtggacaagacacagaggacggggaagggtgactgagggtgttccggataatgaa
gcagctttgacctctccagggtctgctagtagattgagtgggcaatctcgcagtagaaat
ttaaaccggaatcaagagttgagaagagcacctgataacaagaagaatttgagtaggaca
aatgttgatggttttgggatggagagggatgaaaatgatgaatgtttccgagaatgtaaa
gtcggctccaaggatatcacagatctagtgaagaaagctgttggagctgctgaaacagaa
gcaaaaacagctaatgctccagcggaagctgttaaagcagcaggcgatgctgctgcagaa
gtagtcaagagtgctgcttttgaggaatttaagaagtcaaatgatgatgaggctgcagtt
ttggctgcttcaaaagctgcatctacagtcattgatgctgctattgctgttgaagtttca
aggagtgctatttctgaaggtgaatcacaagacataaaagcaacagctcaagaagcaaat
gaagatgttgatgaattcttcattctggatagtgactctcttgcaaagttgcgagagaag
ttctgcatccagtgtcttattattttgggagagtatgttgaagttcttggtcctgtattg
cacgaaaaaggagtcgacgtgtgtattgggctactgcaacgtaattccaagcataaagag
gggtgcagactttcacttcttttgcctgatgttctgaagctgatctgtgctttggctgca
catcggaaatttgctgcagtatttgtggatcgtggcggcatgcaaaaattgcttgctgcc
ccaagagctcctcagactttttgtggcctttcttcatgcttattcgctattgggtcaatt
cagggaataatggaacgtgtttgcactcttccttcaagcattatacatcaggtggttgag
ttggcgcttcagcttcttgaatgtcctcaagatctagccagaaaaaattctgccttgttt
tttgcggcttcatttgttttcagagctgtcgtagatgcttttgatgctcaggatggttta
cagaaaatgcttaatctcttgcaagatgctgcattagtgaggtctggagcttcttcgggg
gcattaactgcttcagggtcattacggagtgacagatcaccaccagaggttctgactgct
tctgagaagcagatagcatatcacacatgtgtcgcacttcgacagtacttcagagcacat
cttctcttgctggtggattcaattcgtcctaataaaagtgttcgcagtgctggacgaaat
atcccaagtgttcgggctgcatctaagcctcttgacattagtaatgaggttatggatgca
gtttcccgtttaatccagaaagatcggagacttggtcctgcagctgttagagcccgctgg
cctgtagttgacaagtttttaaattgcaatgggcatattacaatgttggaattgtgtcag
gctccacctgttgagcgttatttgcacgacttgcttcagtatgctcttggtgtacttcat
atcgtcactttagtaccttacagccgtaaacttattgttaatgcaacattaagcaatgat
cgtgtgggtatagctgttatattggatgcagctaacagtgccggttatgtagaacctgag
attgttgaagcagcattgaacgtgttagtttgtcttgtatgtcctccaccttcaatcagc
aataaaccatctgtatctacacaagcacagcaaaccaatgctgtccaatctgcaaacact
cctggtgtggagaccagagaccggaatgcagaccggagtgagaccagagacagaaatgca
gagcggattcttccagatcgagctgttaatatctccagtcagaatgaaaatagagaatct
actttaccagatcgtggaagcacagcagttcctggcacatctgcggtcagtggcacttct
caagggcccgtgtctacagtgacatcaggattagttggagaccgaagaatatcactaggt
gcaggagctggttgtgctggccttgctgctcaacttgaacaatgttaccgtcaagcgaga
gaagctgttagggcaaacaatggtattaaggtcctcctgcagctcctccagccacggata
gttactcctccagctgcaattgactgtcttcgtgctcttgcttgccgagtacttcttggt
ttggctagagatgatacaattgcacatatattaacaaaacttcaggttgggaagaagttg
tcagaactcatacgagattcaggaaatcagactcctggcagtgaacagaaccggtggcaa
gcagaacttgcacaggtggctattgagcttattggggttgtaactaattctggccgtgca
agttctctggctgctacagatgctgcgacccccacattaaggcgtatagagagagctgct
atagctgctgctactccgatcacatatcatgcaagggaacttttacttctcatccatgaa
cacctacaagcttctggtctgacagacactgcaactatgcttcttaaggaggctcagttg
acacctttgccatctttagctgctccatcatctctggcacatcaaacatcagggcaggag
acatcatcagttcaaattcagtggccatctggtcgtgcacctagaggatttttgtcagct
aaaccgaaacttccaccattggatgaggatgggggattgaaatctgagtcaattgtctgt
tcttcaagaaggaagccattggccttttcgtctgctcgtagtttgtcctcaaaatctttt
cctgttgaagtctctccatctacatcaggctgcaaattcagtaattcgagaaagtgtgcc
acacctatagctacatcagaaactccattactatctacagtgaaagctggtggagatcca
gacatcatgtttaaaactcccattgtattgccaatgaaacgcaagttaactgatctgaag
gaaagtggatcagtatcgtcagttaagcgactcaatactggtgaacatacagtcagatct
ccggtttgtgtcactccaaattcgttccgtagaagtggtctaccatcagatactaatgtg
ccttcaacaccgaattctactttgagagagatccataatcgacctggctcaagtgctttt
ccaactgaaggtgatgatactcctatgctgtcgtcttctcaacatggtcttctaagtgac
acacaaccctcaaatgcggagcggttaaccttggactctctggttgttcagtacttgaag
caccagcatcgccaatgtcctgctcccatcacaacgttaccgcctctttcgctcttgcac
cctcacgtctgtcctgaaccaaaacgaagccttgatgcaccatcaaatgtaacatcacgg
cttagtactcgtgattttagaagtttgaatggtgggacacatggaaagcgtaaggatcga
caattcgtctacagtagatttcgaccgtggcgcacttgccgggatgatgctggtgtctta
ttgacttgtgtctcttttatgggagattcttcgcaaattgctgctggcacccattctgga
gagctgaaaatatttgacactaacagcagcagtatcttagaaagcttcaccagtcaccag
gcacctttaacacttctacagtcctacctttccgttgagacacagcttctcttgtcttca
agttctcacgatgtgcggttatgggatgcaacttctgtttcagctgggcctaagcattca
tttgaaggctgtaaagctgctcgatttagcaatttcggtacaacgtttgctgcattgtct
gcggagcaatctcggcgcgagattcttctgtatgacactcaaacctgccaagtggaactg
aaacttacagacacatccaatattccttcaggccgaggacatatgtattctcttgcacat
tttagcccatcagacaatatgcttctctggaacggtgtcttatgggatactcgtggttct
ggcccaattcaccgttttgatcaatttactgactatggtggcgggggctttcatcctgct
ggcaatgaggtcatcataaattcggaggtatgggatttgcggaacttcaggcttctgcga
agtgtaccgtctttggaccagactgtaataacatttaatgctagtggtgatgtgatatat
gccatcttgagaagaaatcttgaggatgtcatgtccgccttccagacacgtcgtgttaaa
catcctctctttgctgctttccgtacggtggatgctgttaactactccgacattgcaacc
attccagtcgaccgttgtgtacttgactttgcgacggagccaactgattcatttgttgga
ctggtaacaatggatgaccaagatgagatgtactcttctgctagagtgtatgaaattggt
cggaggaggccaactgaggatgattcagaccctgatgatgctgaaagtgaagatgaagat
gaagacgatgatgatgacattgacgaagaagcaatccttggaacggatcttgatggggac
ggtgaaagcgatgcagatgatttgagcaatgatgatgatagtgtgagtgagcttgatgac
gaagaagacgaagacggtgacttcattgtagatggtgtggacttcggtggtggaggtata
ttggagattgtgacagatggtgaagatgaagatgacagtgagcttgttgaatcctttagt
agtggggatgatgatgatgatgatctgttgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (44)   

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