KEGG   Solanum lycopersicum (tomato): 101256087
Entry
101256087         CDS       T02665                                 
Name
(RefSeq) WD repeat-containing protein PCN
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101256087
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sly03009]
    101256087
Ribosome biogenesis [BR:sly03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    101256087
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 RMC1_N
Other DBs
NCBI-GeneID: 101256087
NCBI-ProteinID: XP_004238081
UniProt: A0A3Q7G8K2
Position
4:62697102..62704244
AA seq 809 aa
MLEVHRSSSVEWKPSPVVALATSVDDSQVAAAREDGSLEIWLVSPGSVGWHCQLTIHGNP
NSRVSSLVWCRSGSGGAPAGRLLSSSIDGSVSEWDLFDLRQIALDSIDVAIWQMAVEPCS
NSHLNQKQSPKHCENGHDNHRNSESSDSDSSESEDGDDSVELHEDHASDNSRIAFACDDG
RVRIYVVDDDKNLTFKRSSPSVKGRTLSVTWSSDANRIFSGSSDGVIRCWNAEVTHEIYR
ISVGLGGLGSGSELCIWSLLALRCGTLVSADSSGSVQFWDTQHGTLVNALSNHKGDVNAL
AASPSHTRVFSAGSDGQVVLYKLSVDFAGANEGNVTSGVMKKWVYISHVRAHTHDVKALT
IAVPISREDTIVERDLKRPRSRSKLLDSSYHKWAHLGVPMLISGGDDTKLFAYSAREFTK
FSPHDICPVPQRPHIQLAVNTIFNQAALLLIQASYWIDVLLVRAVSGGAAKTDLVARVKC
KAPRKITCSAVSPSGGLFAFSDHVKCCLFELKRIASSKSPWAVNKSHLPLDLPFAHSMVF
SADSSRLMIAGCDRRVYVVEAGSSELVHVFTPRREEHVEELLPAEPPITRMFISIDGQWL
ATINCFGDVYIFNLETQRQHWFISRLGGHSVTAGGFSPQNSNVLIVSTSSNQVYALDVEA
KQLGEWSNHNTFALPRRYQEFPGEVIGISFPPSSASSSVIAYSPRAMCLIDFGKPVDGDD
EADLANGQDLASKKLYSTLVNGGMKRKLKGSDLETKLNGRKNFEFHAFRDPVLFVGHLSK
TSTLIIDKPWIQVVKSFDTTPVHRHIFGT
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgctcgaagttcatcggagcagctcagttgagtggaagccatcaccggtggtagcctta
gctaccagcgtcgacgattctcaagtcgccgccgcacgtgaggacggttctcttgagatt
tggcttgtttctcctggatcagtcggctggcactgtcagcttacaatacacgggaatcca
aattctagggtttcttcgctggtttggtgtcggtcgggctccggtggtgcgcctgctgga
aggttgttgtcttccagtattgatggatcagtttctgaatgggacctttttgatttaaga
cagattgcgttagattctattgatgttgctatatggcagatggctgtggagccatgcagt
aattcacaccttaatcaaaagcagtctcccaagcattgtgagaatgggcacgataatcat
agaaatagtgagagcagcgatagtgacagcagtgaaagcgaagatggtgatgactctgta
gagcttcacgaggatcatgctagtgataatagccgaatagcatttgcttgtgacgatggc
cgtgtaagaatctatgtagtcgatgatgataaaaatttaactttcaaaagatcatcacca
agtgtcaagggacgtacattgagtgtcacttggagttctgatgcaaataggatattttct
gggagtagtgacggggttataagatgctggaatgccgaagtaactcatgaaatctacagg
atatcagttggtcttggagggctgggtagtggatctgaattatgcatatggtcgctactt
gcattgagatgtggtaccctcgtcagcgccgatagttccgggagtgttcagttctgggac
acccaacatgggactcttgtgaatgcactttccaatcataaaggcgacgtaaatgcttta
gcagcatctcccagccatactagggtgttttctgctggctctgatggtcaggttgtactt
tataagctctctgtggattttgctggggctaacgaaggaaatgtaacctccggagtcatg
aagaaatgggtttatattagtcatgtgagggcccacacacatgatgtgaaggccttgaca
attgctgtacccatcagtcgcgaagataccatagttgaacgggacttaaagagacctcga
tctaggtcaaagctccttgattccagttaccataaatgggcacatttaggtgttccgatg
cttatttcgggtggtgatgacactaaactttttgcgtattctgcgagggagtttaccaag
ttttctccacatgatatttgtcctgtaccccagaggccgcatatacaacttgcagtaaat
acaatatttaatcaggctgcgttactcttaatccaagcttcctactggattgatgttttg
ttagttcgagctgtgtctggtggagctgctaagacagatctggtggcccgagttaagtgt
aaagctccaaggaaaataacatgtagtgcagtttctccttctggcggcctttttgctttt
tctgatcatgtaaaatgctgcctttttgagcttaagagaattgcttccagtaagagtcca
tgggcagtcaacaaaagtcatcttcctttggatctgccatttgcccattcaatggttttc
agtgctgattcttctcggttgatgatagcagggtgtgacagaagggtctatgtggtggag
gcaggaagctcagaactagttcatgtttttacacctcgtcgtgaagagcatgttgaagaa
ctattacctgctgaacctcccataactagaatgttcatcagcatcgacgggcaatggcta
gctactataaactgctttggagatgtgtatatatttaatttagagacacagaggcaacat
tggtttatatcaagattgggtggtcattcggtcacagctggtggttttagtcctcaaaat
agcaatgtgcttatagtatcaacttcttcgaaccaggtatatgccttagatgttgaagct
aagcagttaggggaatggtcgaatcataatacatttgcactgccgagaagatatcaagaa
tttcccggagaagtgattgggatttcattcccaccgtcttctgcttcttcatctgtcatt
gcctatagtccaagggcaatgtgcttgattgactttgggaagccagtagatggtgatgat
gaggctgacttagccaatggtcaagatttggcttcaaagaagctatatagcactcttgtg
aatggaggtatgaagcgtaagttaaagggaagtgacctggagacgaaactcaatggtaga
aagaatttcgagtttcatgccttcagagaccccgtcttatttgttggacatctttcaaaa
acgtccaccttaatcatagacaaaccttggattcaagtcgttaaaagttttgatactaca
cctgttcacagacatattttcgggacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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