KEGG   Solanum lycopersicum (tomato): 101259468
Entry
101259468         CDS       T02665                                 
Name
(RefSeq) uncharacterized protein LOC101259468 isoform X2
  KO
K19027  zinc finger FYVE domain-containing protein 26
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sly03400]
    101259468
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     101259468
SSDB
Motif
Pfam: TPR_2 TPR_1
Other DBs
NCBI-GeneID: 101259468
NCBI-ProteinID: XP_004245416
Position
8:complement(57135129..57198615)
AA seq 2509 aa
MEDKDTELLCKVSANHLFLAQFEPFRATIRSLRVRNPELSRVILQTIVANGGRFDSIIWS
QSCPSPALLTFLCTLELLQFNEPTSQLWSFDAGALKLRAEFCLILQNVISRVSESISSSE
LGAEAVDDVELNGHVSGINEDLKGLGECLRVLVKISDMGLRRLRPDLIEIDDVIDTGGDI
VVEEEEMMCLSRVFLENADIFDVLSLNIEKQVGWIENEDSDRAITVRTVVNHKEVEDNGL
KSLQKCIQTAHLDAMRECLMDNDVDGAVSHIRFLHLNYGITEEEYRVVSKDLLRRVLPGK
DDYGDARREMRSKFLSVYGEALSSRCTPLVKMIQVIHDEMLLEEIESVKGSESDQIPLPL
QHLQNFIQELNSETTLNSTNSLLETVITSCMREMYQYARVHGVHLLECVMDAALSAVRKQ
ELHEASNILLLFPRLQPLLAVLGWDLLSGKTDLRRKLMQLLWTSKSQVLRLEDSPNYGNR
SDEVSCVEHLCDLLCYQLDLASFVACVNSGRSWSLKSSLLLSGKEYLQQENEDAHWDPFV
ENFVLERLSVQSPLRVLFDVVPSIKFQDAIELMSMQPITSNLSAWRRMEDIELMHMRYAL
ESAVLALGEMEKNLGEGVGNDQINLCYLKDLKNHLDAINNIFRKILMVNIIISLLHMDGL
SLNLTPCASSSTSSESSNISKEQQFEDAAQDGQNKTIVMLIGPLLNILRQYLPSSNSEKD
NNWKVNVSAGIKEAIEWRIMNAKRSIEDWEWRLSILQCLLPFSERQWRWREALTILRAAP
SKLLNLCMQKAKYDIGEEAVNRFSLPPEDKATLELAEWVDSAFGRASVEDAVFRAADGTS
PVQELDFSSLRAQLGPLPAILLCIDIAATSAKSSSISCKLLSQAEIMLSEIYPGNSPKIG
STYWDQIREVAVISVIKRVLKRLQEQLEQDKPSALQDILTGEMILLSSKDLQRQGHKERA
LAMLHQMIEDAHMGKRQFLSGKLHNVARALADEETEMEQVKEEGSRSDRKVLLLYSKKGV
LGLGLKTFKQPLTTSATGDNNVPSGSYDVKETGKRLFGPFSSRMATFLSQFVLYLAAIGD
IVDGADTTHDFNYFSLVYEWPKDLLTRLVFEQGSTDAAEKAAEIMNADFVHEVVSACVPP
VYPPRYGHGWACIPVIPTYTEIYSENRVISPSCREAKPGSFTPSAGDAELPLYPLQLDIV
KHLIKLSPVRAVLACVFGSSILYRGRETTVSRSLKSCFLQTPDADRLFFEFALDQSERFP
TLNRWIQMQTNLHRISEFAIMADHTRNDGKDDVPECKTAMKRFRDHDSDAESEVDELAGS
SNISKNPQEIKNETRGSSDLRHDSLKSENSDRTTVFLSFDCENEGPYEKAVERLIDEGKM
MDALAISDRFLQNGASDQLLQLLIERGEENISGQSQGHSGNNNWSHSWQYCLRLKDKQLA
ARLALKYLHRWELDSALDVLTMCSCHLLENDPIKDEVVQMRQALLRYSHILSADNRFRSW
LEVESQCKEDPEGLALRLAEKGAVSAALKVAESEGLSIELRRELQGRQLVKLLTADPLNG
GGPAEASRFLSSLRDTADALPVAMSAMQLLPNLRSKQLLVHFFLKRRDNNLSELEVSRLN
SWALGLRVLAALPLPLQQKCSPLHEHPHLILEVLLMRKQLQSASLILKEFPSLRDNNMIL
RYAAKAIVVSISSSSRDPRIPISTPKARQKTKLGTPTRSSFTSSLSNFQKEARRAFSWVQ
SGDKGTAKDRKRKSSGLMQSERVAWEPTTSIQEDRVTLFSADGQERLPAVAIAEMWMLTG
DPKKDEAVRSSHRYESTPDITLFKALLSMCSDESASAKGALDLCIGQMKSVLSSQKIPEN
ATMETIGRAYHATETFVQGLFFAKSLLRKISGSTDLSSNLERSREADDASSDAGSSSVGS
QSTDELSEVLGQAEMWLVRAELLQSLLGFGVAASLDDIADKESSEHLRNRLILDEKYSMA
VYTCKKCKIDVFPVWNAWGHALIRMERYTQARVKFKQALQLYKGDAATVIMEIIGTIEGG
PPVDVSSVRSMYEHLAKSAPAILDDSLSADSYLNVLFLPSKFPRAGRLKFFLEAFNDNFS
NSTHFEEPRSNLDSVRYAECISYFQDYARQHLFDFMFRHGHYKDACLLFFPPNSVPPPPQ
PSSLAVVTSSSSPQRQDPLATDYGTLDLLCELCIAYGAMPVLEEVLSGRTSNVTTLDPSV
NKHTTAALSRICTYCETHKHFNYLYKFQVIKKDHVAAGLCCIQLFMNSSSQEEAIRHLDN
AKMHFEEGLSARHKAGESTKLITKGIRGKSASEKLTEEGLVKFSARVAIQIDVVRCFNDA
EGTQWKHSLFGNPNDPETFRRRCEIAETLAERNFDLAFQVIHEFNLPAVDIYAGVAASLA
ERKRGSQLTEFFRNIKGTIDDDDWDQVLGAAINVYANKHKERPDRLIDMLTSSHRKVLAC
VVCGRLKSAFQIASRSGSVADVQYVAHQALHANAHPVLDMCKQWLAQYM
NT seq 7530 nt   +upstreamnt  +downstreamnt
atggaagacaaagacacagagctgctgtgtaaagtcagcgcgaaccatctttttttagct
caatttgagccatttcgagccactatacgcagtcttcgtgttcgaaatcctgaactttct
cgagtcattcttcaaacaattgttgcaaatggaggaaggttcgattcgattatctggtct
cagtcttgcccgtctcctgcacttctcactttcctatgtacactcgaacttctccaattt
aacgaacccacttcccagctttggtcgtttgatgctggtgctcttaaattgagggctgag
ttctgtttgatcttacaaaatgtgatttcaagggtttcggaaagcatttcgagttcggaa
ttgggtgcagaagctgtcgatgatgttgaattaaatggacatgtttcgggcattaatgag
gatttgaagggtttaggtgaatgtttgagggttttagtgaaaatttctgatatgggtttg
aggcgcttgaggccggatttgattgaaattgatgatgtcatagatactgggggagatatt
gtagtggaggaagaggaaatgatgtgtttgagcagagtgtttcttgaaaatgcagatatc
tttgatgttttgtcactaaatatagagaaacaagttggttggattgaaaatgaggattcc
gatagggcaattacagtcaggacagtagtaaatcataaggaggttgaggataatgggctt
aaatcgctgcaaaaatgcattcaaactgcacatttggatgctatgagggaatgcctgatg
gataatgatgtggatggagctgtttcacatattcgatttctacatttgaattatggtatc
accgaggaggagtatcgtgtggtctcaaaagatctactcagaagggtgttacctggaaag
gatgattatggagatgcccggcgtgagatgcgaagcaaattcttgtcagtttatggggaa
gcactttcatctcgttgtactcctcttgttaagatgatacaggtaattcatgatgaaatg
ctcttggaagagattgagagtgtcaaaggttctgaaagtgatcagattcctctacctctt
cagcatctccaaaattttatccaagaactgaattctgagacaactttaaacagcacaaat
tcattgctggagactgttattacttcttgcatgagagaaatgtaccagtatgctcgtgtt
catggcgtgcatttattggaatgtgtcatggacgctgctctgtctgccgtgagaaaacag
gaactgcatgaggctagcaatattcttttgctgtttccccggctccaacctcttctagcc
gtccttggttgggatcttttgtctggtaaaacggatttaagaaggaaattaatgcagctt
ctgtggacaagtaaatcacaagttcttcgtttggaggactctccaaattatgggaacaga
tcagatgaggtgtcctgtgttgaacatctctgtgatctcctttgttatcagcttgatctt
gcttcttttgtagcatgtgtgaattctggcaggtcatggagtttgaagtcgtcgctactg
ttgtccggtaaagagtatttgcagcaagaaaatgaagatgcgcattgggatccctttgtt
gaaaattttgtgctggaaagattatctgtacagagtcctttgcgggtattatttgatgtg
gttccaagcattaagtttcaagatgctattgaattgatgagcatgcagccaattacttcc
aatctatccgcctggaggaggatggaagacattgaactcatgcacatgcgttatgctttg
gaatctgctgtccttgcacttggagagatggaaaagaatttaggggagggagtaggaaat
gaccagatcaatttgtgctacctgaaagatttgaagaaccatcttgatgccatcaacaac
attttccgcaagatattgatggtgaacattatcatctctcttctgcatatggatggtctc
tctctcaatttgacaccttgtgcttcatcaagcacctcatctgagtcatccaatatctct
aaggagcaacaatttgaggatgcagctcaagatggacaaaacaagaccattgtaatgtta
atagggccactattgaatattttacggcagtatctaccatcttcaaactcagagaaggat
aataattggaaagtaaacgtatctgctggtattaaagaagccatagaatggagaattatg
aatgcgaaaagatctattgaggactgggaatggcgtttgtcaattttacagtgccttctg
ccattctcggaaagacagtggagatggagggaggctcttactattctacgtgctgcccca
tcgaaactactaaacctctgtatgcaaaaggcaaagtatgatattggagaagaggctgtc
aaccgtttctctttgcctccagaagacaaagctacactagagctagctgaatgggtagat
agcgcctttggaagagcatctgttgaagatgctgttttccgtgctgctgatggaacttct
ccagtccaagaattggatttctcttctttacgtgctcagctaggtcctctaccagctatt
ctcctgtgcattgatatagctgcaacttctgcgaaatcttcaagcatatcctgtaagctt
ttaagtcaggcagaaattatgttgtcagagatttaccctggtaattcccctaaaattggg
tcaacctactgggatcagattcgtgaagtagcagttatatctgtaatcaagcgcgtcctt
aagcgtctacaggaacaactggagcaggataagccttcagctcttcaagacattttaact
ggagaaatgatccttttatcctcaaaggatcttcagcgccaaggacataaggagcgtgca
ctagctatgctgcatcaaatgattgaagatgctcatatggggaagagacagtttctaagc
ggtaagctccacaatgtggcaagagctttagctgatgaagaaacagagatggaacaggtt
aaggaggagggctcacgatctgatagaaaagtattgttactgtacagcaaaaagggggtt
cttgggcttgggttgaaaaccttcaagcagccgctgacaacttcagcaactggtgacaat
aatgtaccttctggtagctatgatgtcaaggaaactggaaaaagattatttgggccattc
agctccagaatggccacgtttctctctcaatttgtcctctaccttgctgctattggtgac
attgttgatggggctgataccactcatgacttcaactacttctcacttgtgtatgaatgg
cctaaagaccttttaactcgtctagtgtttgagcaaggaagtactgatgcagctgaaaag
gcagcagagattatgaatgctgattttgtccatgaagtggtttctgcttgtgttcctcca
gtttatcctccaagatatggtcatggttgggcttgcatcccggtaattcctacatacaca
gagatctactctgaaaatagagtaatatccccttcatgtagagaggccaagcctgggtct
ttcactccttccgctggggatgctgaattacctctctatcctctccaactggatatagtg
aaacatctcatcaagttatccccagttagagctgtattagcatgcgtctttggaagttct
atactttatcgtggcagggagactactgtatctagatctctgaaaagttgctttctacaa
actcctgatgctgataggttattctttgagtttgctcttgaccaatctgagaggttccct
accttgaatcgctggatacagatgcagaccaatcttcatcgaatctcagaatttgcgata
atggctgatcacacgaggaatgatggtaaagatgatgtacctgaatgtaaaactgctatg
aagcgatttcgtgatcatgacagtgatgctgaatctgaagttgatgaacttgctggtagc
agtaatatatcaaagaatccccaggagattaagaatgaaacaagaggatcttctgatctt
aggcatgattccttaaaatccgaaaattctgatcgtacaacagtttttctttcttttgat
tgtgagaatgaaggcccatatgagaaagctgtggaacggttgattgatgaaggaaaaatg
atggatgctcttgcaatttctgatcgtttcttgcaaaatggagcctcagatcagttgctt
cagttgctaattgaacgtggagaagaaaatatatctggacagtctcaaggtcattcaggc
aacaataattggagccacagttggcagtactgtctccgtttgaaagataaacaattggca
gctagacttgcgctcaaatatttgcatagatgggaactagattctgctttggatgttctc
actatgtgcagttgccatttgcttgaaaatgatcctattaaagatgaggttgttcagatg
agacaagctctcctaaggtacagccatatattaagtgcagataaccgcttccgcagctgg
ttagaggtggagtctcagtgtaaagaagatcccgaaggtcttgcccttagattagctgag
aagggagctgtttctgctgctttaaaagttgctgaaagtgaagggctatctattgaactg
cgcagagagctgcaggggcgtcaacttgtgaagcttctcactgcagatcctttaaacggt
ggaggccccgcagaagcttcacgttttctttcttctttacgtgacactgcagatgcttta
cctgttgcaatgagtgcaatgcagcttttgcccaaccttcgatcaaagcagcttctcgtt
cactttttcctcaaaagaagagataataatttatcagagttagaagtttccaggctcaac
tcttgggcattaggattacgtgttctggctgctttgccattaccgttgcagcaaaaatgc
tctccgctacatgagcaccctcatttaattctagaggttttgttgatgagaaaacaactt
caatctgcttctctgatacttaaggaattcccctccttgagagacaacaatatgattctg
agatatgctgctaaagctattgttgtcagcattagttcttcttccagggacccgaggatt
ccaatttcaactccaaaagcaagacagaagacaaaattgggaacacccacaaggtcatca
ttcactagtagccttagtaattttcaaaaagaagcccgcagagcattttcttgggttcaa
tctggagataaaggtacagccaaggataggaagagaaagagctctggattaatgcaatca
gagagggtggcttgggagccaactacttccattcaggaagaccgtgttacattattttct
gcagatgggcaagaacggctgcctgctgttgctattgctgagatgtggatgctcacaggt
gacccaaagaaggatgaagctgtccgttcttctcaccggtatgaaagtacccctgatata
actcttttcaaggccctgctttcaatgtgttcggatgagagtgcatctgccaaaggtgct
ttggacttgtgtataggccagatgaaaagtgtattaagctcccaaaagatacctgagaat
gcaactatggaaactattggccgagcatatcatgccacagaaacttttgttcagggcctg
ttttttgctaaatcccttcttagaaagatttctggaagcactgacttgtctagtaatttg
gaaagaagtcgggaagcagatgatgcatcttctgatgctggcagctctagtgtgggtagt
caatcgacagatgagctgtctgaagtactgggacaagctgagatgtggctagtacgtgct
gaattgctgcaaagtcttttgggtttcggagtagctgcctcacttgatgatatcgctgat
aaagagtcatctgagcatcttcggaatagattaattctagatgagaaatacagcatggct
gtttacacttgcaagaagtgtaagattgatgttttccctgtgtggaatgcatgggggcat
gctctgattaggatggagcgctatacacaagctcgtgttaaatttaagcaagcacttcaa
ttatacaagggtgatgctgcaactgttataatggagattattggcaccattgaaggaggt
ccaccagtggatgtttcatctgttcggtccatgtatgagcatctggctaaaagtgcacca
gccattttagatgattctctttctgctgattcctatctcaatgtgttgttcctaccatcc
aaatttccacgggcagggagactcaagttctttttagaagctttcaatgacaatttttcc
aacagtacgcacttcgaagaacctaggagcaacttggacagtgttagatatgctgaatgc
atcagttattttcaagattatgctcgccaacatctgtttgatttcatgtttcgacatggc
cattacaaggatgcttgcttgttatttttccctcccaattctgttcctccacctcctcaa
ccatcttcattggctgttgtcacttcgtcttcttccccccaacgacaagatcctttggct
acagattatgggacccttgatctattgtgtgaattgtgcattgcttatggggccatgcct
gttttggaggaagtattgtcaggaagaacttcaaatgtaactacactagatccatcagtg
aacaaacatacaactgcagcactttctcgcatctgtacttattgtgaaactcacaagcat
ttcaattatttatacaagtttcaggtgataaagaaggatcatgtggcagctgggctttgt
tgtatacaattgtttatgaactcttcttctcaagaagaagctataagacacttggataat
gccaagatgcatttcgaggaaggcttgtcagcacgacataaagcaggagagtctactaag
cttattaccaagggcatccgagggaaaagtgcctctgagaaactaactgaagaaggacta
gtcaaattttctgctagagttgctatccagatagatgttgtcagatgctttaatgatgca
gaaggaacacagtggaaacattcactttttgggaatccaaatgatcctgaaactttcagg
aggaggtgtgaaattgcagaaactcttgctgagaggaattttgacttggctttccaggtg
atccatgagttcaaccttccagctgttgatatatatgctggtgttgctgcatcacttgct
gagagaaagaggggaagccaactcacggagttctttaggaacattaaaggcaccatcgat
gatgatgattgggatcaggttttgggggcagccattaatgtgtatgcgaacaaacacaaa
gagcgacctgaccgcctgattgacatgttgactagtagccacaggaaagtacttgcatgt
gttgtttgtgggcgtctcaaaagtgcattccaaattgcatctagaagtggaagtgtggca
gatgttcaatatgttgcacatcaggcattacatgctaatgcacatccagttcttgatatg
tgcaagcaatggctcgcccagtacatgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (56)   

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