KEGG   Solanum lycopersicum (tomato): 101260299
Entry
101260299         CDS       T02665                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    101260299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sly03400]
    101260299
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     101260299
SSDB
Motif
Pfam: XPG_N XPG_I UBM
Other DBs
NCBI-GeneID: 101260299
NCBI-ProteinID: XP_004233336
Position
2:38370500..38379772
AA seq 1539 aa
MGVQGLWDLIAPVGRRVSVETLSGKKLAIDASIWIIQFMKAMRDEKGEMVRNAHILGFFR
RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKAMRLK
ELSVDLENQRKLNDAKGKKVITEATGMMENMAEGNALGVENYDKEALDEMLAASIQAEED
WNFADDASTSCAAAPAENDNTDEDEEMILPDTQGKVDPSVLAALPPSMQLDLLGQMRERL
MAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIGEVQKAAAGRGIGGVRTSRIASEA
NREFIFSSSFTGDKDVLASAGEDQTSKKSSEVQTENNLANAASDASTRKSSSVLESIVSE
PETAFNDDVETYLDERGHLRVSRLRAMGVRMTRDLQRNLDLMKEIEEENVSRNKDFSDVP
TVSDTDVHTPVIVSDTISHLNSSNPDDDGKACLNNKNEQSELRSGTTIQISFEDNFEHDC
ANDDDDIFASLVAGDPTMEFLMDHSPSKKQSLDSASDVEWEEGVIEKKGDLLSNNSQGER
QAPLEIDGMDDEAEVEWEEGCVDICEDPPLLPSDSKSAYKGALEEEANYQEAVRRSLEDM
KDHRYIDKSHEKEMSEEAIQIAAQGISSESFGQENYCPTVHKILQQKDLPSEIQTADLHD
TVHEMDIAGSNKSLGSHMGEQFQANSGYGNMQIEKANSHADRNLQIEKATSHTNRNLHCD
IHMEPTIPLDGSEVDMTKKKIADTTVGVSCNNNTQSASDVTSIEQSTLNESMNARTTDAQ
EYESEAAAHHYTHETTEITKAFTEGFTTDINSAQNLDEEGACDDPLFERIGNLDSASTKE
DQKVMMASLEEEMHVLDKEREKLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAP
MEAEAQCAYMELTDLVDGVVTDDSDAFLFGARSVYKNIFDDRKYVETYFMKDVESELGLD
REKIIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLQKFREWVESPDPSILGGLDS
QVGSNSRKRGCKGGDPDMSCSTSNLEGNAASEDRAEKSRQSFMNKHRNISKNWHIPSSFP
SNAVISAYTSPRVDKSTEPFAWGKPDVSVLRKVCWEKFGWSSQKADELLVPVLKEYNKHE
TQLRLEAFYSFNERFAKIRSKRINKAVKYMTGNKSSDLMDGSAQDAPGICKKRVVKSNDM
NEEKMEDPPRGHESAGADYEETTTKRSVGKQSRKRKGGHLQTEHLEPPEGAGSKRNTSKK
SSGSIGGRKETARSVWKAGKNSSRSSKISSEGEKDSDIEQQSQIEKPEKTNQTRRSQRHR
KIVNYSEKRDDESDKDDGDSTAEKLERREAGVDVDVAERYPADSSKMNENDASNDYCPQE
LPNLETNAGGAEMESTAQPIFDETYDPIPGDLLSKEYLKMGGGFCLEENDGDMEHEINAS
SPILSVEGSDIYNSSQLLGDENNGNASNQLISSPSRKTSEKQCEAGIGASEIEQDLHNTT
NITCNDVSPHLENMGKNDYVSSSVFLRAMPNLRKRKKNS
NT seq 4620 nt   +upstreamnt  +downstreamnt
atgggtgttcaaggtctctgggatctcatcgcccctgttggccgccgcgtctccgtcgag
accctctccgggaaaaaactggcaatcgatgcgagtatatggattatacaattcatgaaa
gcaatgcgagatgaaaagggagagatggtgcggaatgctcatattttgggatttttccgt
cgaatttgcaagctactttaccttcggaccaagccagtgtttgtatttgacggaggtaca
cctgctctgaaacgtcgaacagtgattgcgcgtcgccgccagagggaaaatgctcaggcc
aaaattaggaagacggctgaaaagttgctccttaatcatcttaaggcaatgaggctcaaa
gagctatctgtggatctggagaaccagaggaaactgaatgatgcaaagggtaaaaaggtt
ataacagaagcaactggaatgatggagaacatggctgaaggaaatgccttgggggtagaa
aattatgacaaagaagcattggatgagatgttggcagcttctattcaagcagaggaagac
tggaattttgctgatgatgcatcaacatcttgtgctgcggcacctgctgaaaatgataac
accgatgaagatgaagagatgatactgccagatacacaaggaaaagttgatccttctgtt
ttagctgctttacctccatctatgcaacttgatcttcttggtcagatgagggagagattg
atggcagagaacagacaaaagtatcagaaggttaagaaggccccggagaagttctcagaa
ctgcaaatacaatcttatctgaagactgttgcttttcgacgcgagataggtgaagttcag
aaagctgctgccggaaggggaataggtggtgtacgcacttcaaggattgcttctgaagca
aacagggaatttattttctcctcatcttttactggggacaaagatgtccttgcatctgct
ggggaagatcaaactagtaagaagtcaagtgaagtacaaacagaaaataatttggcaaat
gctgcaagtgatgcttcgacaaggaaatctagtagcgtgctagaatcgattgtgtctgag
cctgaaacggcatttaatgatgatgtggagacatatctggatgagaggggtcatcttcga
gtcagcagactgagagccatgggtgttcgtatgactcgagatttgcagagaaatttagat
ttgatgaaagaaattgaggaggagaatgtgtccagaaataaagattttagtgatgtgcct
actgtaagtgacactgatgtacatacccctgtaattgtctctgacacaatttcgcatctg
aactcatccaatccagatgatgatgggaaggcttgtttaaacaacaaaaatgaacagtct
gagttgagaagtgggactacaattcagatatcttttgaagataattttgaacatgattgt
gccaatgatgatgatgatatatttgcgagtttagtggcaggtgatccaacgatggaattt
cttatggatcattccccttcaaagaagcagtctctagattctgcttcggatgttgagtgg
gaggaaggagtgattgaaaagaaaggtgacttgctaagcaataattctcaaggggaaagg
caggctccactggagatagatggcatggatgatgaggctgaagtagaatgggaagaagga
tgtgtagacatttgcgaggatcctcccttacttccgtcagattcaaaaagcgcttataaa
ggtgctttggaagaagaagccaattatcaggaagcagtaaggaggagtcttgaggatatg
aaagatcatagatacattgacaaatctcatgaaaaagagatgtctgaagaagctattcaa
atagctgctcagggtataagtagtgaatcttttggtcaagagaactactgtccaacggta
cacaaaattcttcaacagaaagatttaccatctgaaattcagactgctgacttgcatgat
actgttcatgagatggatatcgcagggagtaataaaagtttggggagccatatgggagaa
caatttcaagctaattctggttacggaaatatgcagattgaaaaagcaaacagtcatgct
gacagaaatttgcaaattgaaaaagcaaccagtcatactaacagaaatttgcattgtgac
atacatatggaaccgaccattcctcttgatggatcagaagttgacatgactaaaaagaag
atagcagataccactgttggggtttcgtgtaacaataacacacaaagtgcttcagatgtt
acttctatagaacaatcaacattgaatgaatcaatgaatgcaagaaccactgatgcccaa
gaatatgaatctgaagcagccgcacatcattatactcatgagacaacagaaatcaccaaa
gctttcaccgagggttttacaactgatatcaatagcgcacaaaacctagatgaggaaggt
gcttgtgatgacccattatttgagagaatcggcaatttggactccgcaagtacaaaagaa
gatcaaaaagttatgatggctagtttggaggaggagatgcatgtattggataaagagcgt
gaaaaactaggagatgagcagagaaagcttgagcgcaatgcagagtctgttagctctgaa
atgtttgcagagtgccaggagttgctccaaatgtttggcttgccatatatcatagctcca
atggaagctgaagcccaatgtgcgtacatggaacttacagatcttgttgatggtgtggtt
actgacgactctgatgcattcttatttggtgctcgaagtgtatacaagaatatttttgat
gatcgcaaatatgtggagacatactttatgaaggatgtggagagtgagcttgggttggat
agagaaaaaataattcgtatggcattgctccttgggagcgattatactgaaggagtgagc
gggattggtattgttaatgctattgaagttgtaaatgcatttcctgaggaagatggtctt
cagaaatttcgtgagtgggtggaatcaccagatccatccattctcggggggcttgattca
caggtaggttccaactctaggaagagagggtgtaaaggtggtgatcctgatatgagttgc
tcaaccagtaatctggaaggcaatgctgcttccgaggacagagctgaaaagtcgaggcag
agtttcatgaataaacatagaaatattagtaaaaactggcatattccttcttcatttccg
agtaatgcagtaatttcagcatatacgtctcctcgagttgacaagtcgacagagcctttc
gcatgggggaaacctgatgtttctgttcttcggaaagtttgttgggagaaattcggctgg
agcagccagaaggcagatgaattgctagtacctgtcctgaaagagtacaacaaacatgag
acacaacttcgactggaagccttctactcttttaatgagagatttgctaaaatccgtagc
aagaggataaataaggctgttaaatatatgactgggaacaaatccagtgatttaatggac
ggaagtgcacaagatgctcctggaatctgtaaaaaaagagtagtaaaatctaatgatatg
aatgaggaaaagatggaggatcctccgaggggacatgagtctgctggtgctgattatgag
gagactacaacaaaaagatcagttgggaagcagtcaaggaaaaggaaaggagggcatctg
cagactgaacatttggaacctccagagggagcaggaagcaagcgaaataccagtaagaaa
tcaagtggtagtataggaggacggaaggaaacagctcgatctgtgtggaaggcaggtaaa
aattcctccagatcctccaaaataagctctgagggtgaaaaagatagtgatatagagcaa
caatcacaaatcgagaagcctgaaaagacaaatcaaacaagaaggtcacagcgtcatcgg
aaaatagtaaattacagtgagaagagagatgatgagtctgacaaagatgatggagattct
actgctgaaaagttagaaaggagagaagcaggagtagatgtggatgtagctgaacgttat
cctgctgattctagtaagatgaatgagaatgatgcaagtaatgattactgtccacaagaa
ctgccaaaccttgaaacaaatgctggtggggctgagatggaatctactgctcaaccaatc
tttgatgaaacttatgatcctattcctggggatcttttgtctaaggagtaccttaaaatg
gggggtgggttttgtttagaggaaaatgatggagatatggagcatgagataaatgcttct
agccctattttatcagttgagggttctgatatttataattcttctcagcttttgggagat
gagaataatggtaatgcttcaaatcaattgatttctagcccctcaaggaaaacaagtgag
aagcaatgtgaagcagggataggtgcatctgaaattgagcaagatttacacaacacaact
aatattacttgtaacgatgtatccccgcacctagaaaatatggggaagaatgattatgtt
tccagttcagtatttctccgtgcaatgccaaatttgaggaagcggaaaaagaatagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (59)   

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