KEGG   Solanum lycopersicum (tomato): 101261376
Entry
101261376         CDS       T02665                                 
Name
(RefSeq) autophagy protein 5
  KO
K08339  autophagy-related protein 5
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:sly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    101261376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    101261376
   03029 Mitochondrial biogenesis [BR:sly03029]
    101261376
Membrane trafficking [BR:sly04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    101261376
Mitochondrial biogenesis [BR:sly03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    101261376
SSDB
Motif
Pfam: ATG5_UblA ATG5_HBR ATG5_UblB
Other DBs
NCBI-GeneID: 101261376
NCBI-ProteinID: XP_004231625
Position
2:31149956..31167191
AA seq 369 aa
MESKGGGTEAQKYIWEGAIPLQIHLHESEITTLPTPPPAMILAPRIGYLPLLAQKVKPFF
SNSLPPGVDTIWFEYNGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILTPCDS
EDSVKWSFINSFKEAAYIINGNCKNVMNMSQSDQLELWRSIMDGDLDSYLRISSKLKFGI
LVDDFSIQLNISSPKSPESTQNADGTAPAKTGRIPVRLYVRTINEDFDELEDAPVVESWD
RISYINRPVQIHGDGKCFTLYDAVTKLLPEFFGEKLPPTDDVSKEEVEVEQRSSPEETNK
SNTERSGEMLNEGIVSCSISDGAEIKLLRIQGIEPKMEIPFAWVVNNLMNPEYFLHICVY
VKIQEPITI
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggaaagtaaaggaggaggaactgaagcacagaagtatatatgggaaggagcaatccct
ctgcagattcatcttcatgaatccgaaatcactactctccctactcctccccctgctatg
attttagctcctcgaattgggtacctgcctcttttagcacaaaaagtaaagcctttcttc
agtaattcacttcctccaggtgtagataccatatggtttgagtacaatggcttgcctctc
aaatggtatatacctactggggtactctttgatcttctttgtgcagaacctgaacggcct
tggaatctgacggtacattttagaggatatcctggaaatattttaacaccctgtgacagt
gaagatagtgtaaaatggagctttatcaattcatttaaagaggcagcatatataatcaat
gggaactgcaaaaatgtaatgaatatgtcccaatctgaccaattagaactctggcgctcc
attatggatggtgatttggactcttatcttcgaatctcatctaagctaaaattcggcata
cttgtggatgatttttcgatacaattgaacatttcctctcctaaatcaccggaaagcact
caaaatgcagatggcacagcaccagctaaaactggtagaataccggttcgactgtatgtt
agaactatcaatgaggattttgacgagttagaagatgcacctgttgttgaaagttgggac
agaatctcttacataaacagacctgttcagatccatggagatggtaaatgcttcaccttg
tatgatgcagtaacaaaacttctgcccgagttttttggggaaaaacttccgccaacagat
gatgtatctaaagaagaagttgaggttgaacagagatcatctccagaagaaacaaacaag
agcaacacggaacgaagtggggagatgttgaatgagggcatcgtctcttgctctatttca
gatggtgctgagatcaagctcctgcgcattcagggaattgaaccaaagatggagattcct
tttgcatgggtggtaaacaatttgatgaaccctgagtactttcttcatatttgtgtgtat
gtcaaaatacaagaacccatcaccatatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (17)   
   RefSeq(nuc) (11)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (49)   

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