KEGG   Solanum lycopersicum (tomato): 101263320
Entry
101263320         CDS       T02665                                 
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101263320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sly03019]
    101263320
   03110 Chaperones and folding catalysts [BR:sly03110]
    101263320
   03029 Mitochondrial biogenesis [BR:sly03029]
    101263320
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sly04147]
    101263320
Enzymes [BR:sly01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     101263320
Messenger RNA biogenesis [BR:sly03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     101263320
Chaperones and folding catalysts [BR:sly03110]
 Heat shock proteins
  HSP60 / Chaperonin
   101263320
Mitochondrial biogenesis [BR:sly03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    101263320
Exosome [BR:sly04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101263320
  Exosomal proteins of other body fluids (saliva and urine)
   101263320
  Exosomal proteins of breast cancer cells
   101263320
  Exosomal proteins of colorectal cancer cells
   101263320
  Exosomal proteins of bladder cancer cells
   101263320
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 101263320
NCBI-ProteinID: XP_004239874
UniProt: A0A3Q7HGC8
Position
5:64408207..64414351
AA seq 573 aa
MYRFAAKLASKSRVARSSTQQVGSRLNWSRNYAAKDIKFGVEARGIMLQGVEQLADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDAAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGEIIARAMEQVGKEGVITIQDGKTLLNDLQVVEGMKLDRGYISPYFITNEK
NQKCELDDPLILIHEKKISSINAIVKVLELALKRQRPLLIVSEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKANLQDLAALTGGQVITEELGMNIENVELEMLGKCKKVTISKDD
TVVLDGAGEKKAIEERCEQIRSAIELSTSDYDKEKLQERLARLSGGVAVLKVGGASEVEV
GEKKDRVTDALNATKAAVEEGILPGGGVALLYASKELDSLPTANFDQKIGVQIIQNALKT
PVYTIASNAGVEGSVVVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLLTTTEAVIVELPKDEKAAPAMPGGGMDY
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgtatcgttttgcagcaaaacttgcttctaaatccagggttgccagaagcagcacccaa
caggttggtagtaggttgaattggagcagaaactatgctgctaaggatattaaatttgga
gttgaagctaggggaattatgcttcaaggagttgagcagcttgctgatgcagtcaaagtc
actatgggtccaaagggtcgtaatgtggtgattgaacaaagttggggtgcacccaaggtg
acaaaagatggtgtcactgttgcaaaaagcattgaattcaaggataaaataaaaaatgtt
ggtgccagccttgtaaagcaagttgccaatgccactaatgatgctgctggcgatggtacc
acttgtgcaacagtactcacccgagcaatatttgctgaagggtgcaagtctgtagctgct
ggtatgaatgcaatggatcttagacgaggtatcacaatggctgtcgatgctgttgtaaca
aacctgaaaagcagagcacggatgataagcacatccgaggagattgcccaggttggtaca
atctctgcaaatggagaacgggaaataggtgagataattgcaagggctatggagcaagta
ggaaaagaaggtgtcatcactattcaagatggaaagacactgcttaatgatttgcaagtt
gttgaggggatgaagttggacaggggctacatatccccatacttcatcacaaatgagaag
aatcagaaatgtgagctggatgacccacttattcttattcatgagaaaaagatctcaagc
ataaatgctattgtgaaagtgttagaattggctttgaagagacaaaggcccctcctaatt
gtgtccgaagatgtggagagtgaagcactcgctacacttattctgaacaagcttcgtgct
ggaatcaaggtttgcgccataaaagcaccaggatttggtgaaaacaggaaggctaatttg
caagatttggctgctttaactggaggccaggtcattaccgaagaacttggaatgaacatt
gaaaatgtggagttggagatgctgggtaaatgcaaaaaggtgaccatctccaaggatgac
actgttgttcttgatggtgcgggtgagaagaaggccatagaggagagatgtgaacagatt
agatcagcaattgaactgagcacgtctgattatgacaaggagaaattgcaggaaagacta
gctaggctttcagggggtgttgcagtgttgaaggtaggaggagctagtgaagtcgaggtt
ggtgagaagaaagacagagttacagatgctttgaatgccacaaaagctgctgtcgaggaa
ggaattcttccaggtggtggggttgcacttctttacgcatcaaaagaactggactcattg
ccaacagccaactttgaccagaagattggtgttcaaattattcagaatgctttgaagaca
ccagtatatacaattgcctctaatgctggggtggaaggatcagtagtggttggcaaactg
ttggagcaggataacccggatcttggatatgatgctgcaaaaggtgaatatgttgacatg
gtaaaagcaggaatcattgatccattgaaagtaattaggacggccttggttgatgctgct
agtgtgtcgtctttattaactacaactgaagctgttatcgttgagcttcccaaggacgag
aaggcagccccagctatgcctggtggtggtatggactactaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (57)   

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