KEGG   Solanum lycopersicum (tomato): 101266590
Entry
101266590         CDS       T02665                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable rhamnogalacturonate lyase B
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    101266590
Enzymes [BR:sly01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     101266590
SSDB
Motif
Pfam: Rhamnogal_lyase CBM-like fn3_3 CarboxypepD_reg CarbopepD_reg_2
Other DBs
NCBI-GeneID: 101266590
NCBI-ProteinID: XP_019066431
Position
11:4320392..4331567
AA seq 600 aa
MQKMLRYMVALLLFIVADCHPHNGYWDTVWSYTEPRTIFSKKFTGTSFEVIIHNENQTEL
SFKRKWNASQSNQLPLNIDKRFIMLRDTPGFYTYSIVERLKGWPISSIQNIRLVFRLQTD
MFNYMVVSDERQRVMPTDVDRNNGKVLGYKEAVLLTDPTNPDLKGEVDDKYFYSNDDKDG
KVYGWISTTNPLLGFWMINPSNEYRIGGPLKQDLTTHVGPTVLTVFCSTHYAGEDLAIKF
EQGESWKKVLGPVFVYLNSNAAAKANPSILWNDAKKRLQVWPYEFALSKDYIKSNQRGTV
RGQLFVNDGFISKQNVAASNAYVGLSPPGEAGSWQTENKGYQFWTKTDGKGNFIIENVIF
GTYNLYATVPGFIGDYKYTSNIKVTPGSNIKLGTLIYKPPRNGDTIWEIGIPDRSAAEFF
IPNPPSQFKVHKYKNNSETKFRQYGLWEQYGVLYPKNDLVYNVGTSNYSKDWFYAQVTRK
IGINTYNGTTWKIIFNLANVNIASNYTIQLALAAAEEADLHVLIINDEKLQEPHFSTGNI
GGSNAIARHGIHGLYFLYSIGIQGKLLVNGANTIFLIQSSGLSPFEGIMYDYIRLEGPNQ
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgcagaaaatgttgagatatatggttgctttgttgttgttcatagtagctgattgtcat
cctcacaatgggtattgggatactgtttggagttacactgagcctcgtacaattttttca
aaaaagtttacaggaacaagttttgaggtaataattcacaatgaaaaccagacagaactt
tcatttaaaagaaaatggaatgcttctcaatcaaatcaacttcccctaaacattgataaa
agatttataatgctacgcgatacaccaggattttatacgtattcgatcgttgaacgttta
aaaggatggccaatttcgtctatacaaaatatcaggcttgtgtttaggcttcaaacagac
atgtttaattacatggttgtttctgatgagaggcaacgtgtcatgccaacagacgtggat
agaaacaatggcaaagttcttggctacaaagaagctgttcttctcactgatccgactaat
ccagatttaaaaggagaggtggatgacaagtatttctattcaaatgatgataaagatggt
aaagtttatggatggattagtactactaatcctctattagggttttggatgattaatcca
agtaatgaatatcgtattggaggtcctcttaaacaagatcttactacacatgttggtcca
actgttcttactgtattttgtagtacacattatgctggagaggatttagcaattaaattt
gaacaaggagaatcatggaaaaaagttttaggtcctgtttttgtgtatctaaattcaaat
gctgcagctaaggcaaatccttccatactttggaatgatgcaaagaaaagattgcaagtt
tggccttatgaatttgcactttcaaaagactacatcaaatctaaccaaagaggaactgtt
agaggccagctatttgtcaatgacgggtttatcagtaaacaaaatgtggcagcatccaat
gcttatgtaggattatcaccaccaggagaagctggatcttggcaaacagaaaacaaaggg
tatcagttttggactaaaactgatggtaaaggaaatttcatcatagaaaatgtcatattc
ggtacatataatttgtatgcaacagttccaggttttatcggggattacaaatacacttca
aatataaaagttactccaggttcaaatattaaattaggtactttgatttataaacctcca
agaaatggagatacaatttgggaaattggtataccagatagaagtgctgctgaatttttt
attccaaatccaccttcacaattcaaagttcacaaatacaaaaataattctgaaacaaaa
tttagacaatatggtttgtgggaacaatatggtgttttatatcctaaaaatgatcttgtc
tacaatgttgggactagcaattactctaaagattggttttatgctcaagttactaggaaa
ataggaattaatacatataacggtactacatggaaaattatatttaaccttgccaatgtt
aatattgcctcaaattacacaatccaattggctcttgctgcagctgaggaagctgaccta
catgttcttattattaacgatgaaaaattacaagaacctcatttttcaactggaaatata
ggaggaagtaatgctatcgcaagacatggaattcatggattatattttctttatagcatt
ggaatacaaggcaaattgcttgtcaatggagcaaacactatttttcttatacaatcaagt
ggtctctcgccatttgaaggtataatgtatgattatattcgtttagaaggacctaatcag
taa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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