KEGG T02665: 3950474

Solanum lycopersicum (tomato): 3950474

Entry

3950474           CDS       T02665

Symbol

ycf1, LyesC2p009

Name

(RefSeq) hypothetical chloroplast RF1

Organism

sly Solanum lycopersicum (tomato)

SSDB

Motif

Pfam:

Ycf1

Other DBs

NCBI-GeneID:

3950474

NCBI-ProteinID:

YP_008563147

UniProt:

Q2MI42

Position

Pltd:complement(125294..130969)

AA seq 1891 aa
MIFQSFLLGNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLRALVMEEGTEKKVSA
TTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTTRNS
MRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYLFRCNNKILFVTSGFVGWLIGHIL
FMKWLGLVLVWIRQNHSIRSNKYIRSNKYLVLELRNSMARIFSILLFITCVYYLGRIPSP
ILTKKLKEASKTEERVESEEERDVEIETASEMKGTKQEQEGSTEEDPYPSPSLFSEEGWD
PDKIDETEEIRVNGKDKIKDKFHSHLTETGYNNINTSNSPIYDYQDSYLNNNNTGNLENC
KLQLLDKKNENQEQDLFWFQKPLVSLLFDYNRWNRPFRYIKNNRFEQAVRTEMSQYFFDT
CKSDGKQKISFTYPPSLSTFWKMIKRKIPLLSLQKTLPNELDTQWVSTNKEKSNNLNKEF
LNRLEILDKESLSLDILETRTRFCNDDTKKEYVPKMYDPLLNGLYRGTIKKGVSSSIINN
TLLENWEKRVRLNRIHTIFLPNIDYQEFEQKAYTIDKKPLSTEIDEFLTLINELGNEAKS
SLNLKGLSLFSDQEQRRANSEKRTKFVKFVFNALDPNETKSGKKSIGIKEISKKVPRWSH
KLITELDQQMGEFKDRASMDHQLRSRKAKRVVIFTDNKATKDAEEEVALISYSQQSDFRR
GIITGSMRAQRRKTFISKLFQANVHSPLFVDRITPLRLFSFDISELIKPILKNWTDKEGE
FKILESREEQTKREEKKEKDKKEDNKRKEQARIAIEEAWDTIPLAQIIRGYMLITQSILR
KYILLPALIIAKNIGRMLFLQLPEWSEDLQEWNREMQIKCTYNGVQLSETEFPKNWLRDG
IQIKILFPFCLKPWHISKLYPSRRELMKKQKQKDDFCFLTVWGMEAELPFGSPRKRPSFF
EPIFKELEKKIGKFKKKYFLTLKILKGKTKLFRKVSKETTKLFIKSIGFLKKIKKELSKV
NLIVLFRFKEISESNETKKEKDYLISNQIINESFRQIESGNWPNSSLIETKMKDLTNRTS
TIKNKIERITKEKKKVTPEIDINPNKTNNIKKFESPKKIFQILKSRNTRVIWKFHYFLKL
FIQRLYINLFLSIINIPRITTQLFLKSTNKLIEKFISNNEINQEKINNQKKIHFMFISTI
KKSLYNISKKNSHILCDLSYLSQAYVFYKLSQTQVINFSKFRSVLQYNTTSCFLKTKIKD
YFKTLGIFHSELKHKKLQSYRINQWKNWLRWHYQYDLSQIRWSRLMPKKWRTRVNQSCMA
QNKNRNLNKWNSYEKDQLLHYKKENDSELYSLSNEKDNFKKCYGYGLLAYKSINYENKSD
SFFSRLPFEVQVKKNLEISYNSNTSKHNFVDMPGNLHINNYLRKGNILDRERNLDRKYFD
WKIIHFSLRQKGDIEAWVKIDTNSNPNTKIGINNYQIIDKIEKKGVFYLTTHQNPEKTQK
NSKKFFFDWMGMNEKIFNRPILNLEFWFFPEFVLLYNVYKIKPWIIPSKFLLFNLNTNKN
VSQNKNQNFFLPSNKKIKIKNRSQEAKEPPSQRERGSDIENKGNLSPVFSKHQTDLEKDY
VESDTKKGKNKKQYKSNTEAELDLFLKRYLLFQLRWNGALNQRMFENIKVYCLLLRLINP
TKITISSIQRREMSLDIMLIQANLPLTDLMKKGVLIIEPIRLSVKDNGQFIMYQTIGISL
IHKSKHQTNQRYREQRYVDKKNFDEFILQPQTQRINTEKTHFGLLVPENILWSRRRRELR
IRSFFNSWNWNVVDRNSVFCNETNVKNWSQFLGERKPLYKDKNELIKFKFFFWPNYRLED
LACMNRYWFDTNNGSRFSILRIHMYPRLKIN

NT seq 5676 nt +upstreamnt +downstreamnt
atgatttttcaatcttttctactaggtaatctagtatccttatgcatgaagataatcaat
tcggtcgttgtggtcggactctattatggatttctgaccacattctccatagggccctcc
tatctcttccttctccgagctctggttatggaagaaggaaccgagaagaaggtatcagca
acaactggttttattacgggacagctcatgatgttcatatcgatctattatgcgcctctg
catctagcattgggtagacctcatacaataactgtcctagctctaccatatcttttgttt
catttcttctggaacaatcacaaacacttttttgattatggatctactaccagaaattca
atgcgtaatctcagcattcaatgtgtattcctgaataatctcatttttcaattattcaac
catttcattttaccaagttcaatgttagccagattagtcaacatttatctctttcgatgc
aacaacaagatcttatttgtaacaagtggttttgttggttggttaattggtcacatttta
ttcatgaaatggcttggattggtattagtctggatacggcaaaatcattctattagatcg
aataagtacattcgatctaataagtaccttgtattagaattgagaaattctatggctcgg
atctttagtattctcttatttattacctgtgtctactatttaggcagaataccctcaccc
attcttactaagaaactgaaagaagcctcaaaaacagaagaaagggtggaaagtgaggaa
gaaagagatgtagaaattgaaactgcttccgaaatgaaggggactaaacaggaacaagag
ggatccactgaagaagatccttatccttctccttcccttttttcggaagaagggtgggat
ccggacaaaatcgatgaaacggaagaaatccgagtgaatggaaaggacaaaataaaggat
aaattccactctcaccttacagagacaggctataacaatattaatactagtaatagtcca
atttatgattatcaggattcttatctgaataataataacacggggaatctagaaaattgt
aaattgcaactgcttgataaaaaaaatgaaaatcaagaacaagacctcttctggtttcaa
aaacctcttgtgagtcttcttttcgattataatcgatggaatcgaccatttcgttacata
aagaataatcgatttgagcaggccgtaagaacagaaatgtcacaatatttttttgacaca
tgtaaaagtgatggaaaacaaaaaatatcttttacatacccgccaagtttatcaactttt
tggaaaatgataaaaagaaagatacccctattgtcactccaaaaaacgctccctaatgaa
ctggacactcagtgggtttctaccaacaaagaaaaaagtaataatctaaataaggaattt
ttaaatcgacttgaaattctagacaaggaatctctttctctggatatactcgaaacaagg
actagattttgtaatgatgatactaaaaaagaatacgtgcctaaaatgtatgatcctttg
ttaaatggactatatcgaggaacaataaaaaagggggtttcatcttcaatcataaacaat
actttgctagaaaattgggaaaagagagttagactaaataggattcatactatctttctt
ccgaatattgattaccaagaatttgaacaaaaagcgtatacgattgataaaaaaccatta
tcaacagaaattgacgagttcttaactttaatcaatgaattaggtaacgaagcaaaatcg
agtttaaatttgaagggtctttctttattttcagaccaagaacagagaagagcgaattca
gaaaaaagaacgaaatttgtcaaatttgtattcaatgcacttgatcctaatgagacaaaa
tcgggaaaaaaatcgattggaataaaagaaatcagtaaaaaagtacctcgctggtcccat
aaattaatcaccgaattggaccaacaaatgggtgaatttaaagatcgcgcatcaatggat
catcaacttcgttcaagaaaagccaaacgtgtagttatttttactgacaacaaggcgact
aaggatgctgaggaggaagtggctttaataagctattcgcaacaatcagattttcggcga
ggtataattacaggctctatgcgggctcaaaggcgcaaaacatttatttcgaaactattt
caagcaaatgtacattcccccctttttgtcgacagaataacccccctacgtcttttttct
tttgatatctctgaactaattaaaccaattttgaaaaattggacagataaagagggagaa
ttcaagattctagagtctagagaagaacaaacaaaaagagaagagaaaaaagaaaaggac
aaaaaagaggataacaaaagaaaggaacaggcacggatagcgatcgaagaagcctgggat
accattcctttggcacaaataataagaggttacatgttaataactcaatcaattcttcga
aaatatattctattacctgcattgataatagccaaaaatatcgggcgtatgttattcttg
caacttcctgaatggtctgaagatttacaggaatggaatagagaaatgcagattaaatgt
acttataatggtgttcaattatcagaaacagaatttccaaaaaattggttaagagacggg
attcagatcaaaattttatttcctttttgtctgaaaccttggcatatatctaaactgtac
ccctcccgcagagagctaatgaaaaagcaaaaacaaaaagatgatttttgttttttaaca
gtttggggaatggaagctgaacttccctttggttctccccgaaagcgaccttcatttttt
gagcccatttttaaggaactcgaaaaaaaaattggaaaattcaaaaagaaatattttcta
actctaaaaattttaaaaggaaaaacaaaattatttagaaaagtttcaaaagaaaccaca
aaattgtttatcaaaagtattggatttctaaaaaaaataaaaaaagaactttcaaaagta
aatctaattgtattatttagattcaaagaaatatctgaatccaatgaaacaaaaaaagaa
aaagattatctaattagtaatcaaataattaacgaatcatttcgtcaaattgaatctgga
aattggccaaattcttcactgatagaaacaaaaatgaaggatttgactaatagaacaagt
acaatcaaaaataaaatagaaagaattacaaaagagaaaaagaaagtaactccagaaata
gacattaatcctaataaaacaaataatattaaaaaattcgaatcgccaaaaaaaattttc
caaatattaaaaagcagaaatactcgagtaatatggaaattccattattttctaaaatta
tttattcaaagattatacatcaatttatttttatctatcattaatattcctagaattact
acacaactctttcttaaatcaacaaacaaattgattgagaaattcatctccaataatgaa
ataaatcaagaaaaaattaataatcaaaaaaaaattcactttatgtttatttcgactata
aaaaagtcactttataatattagtaagaaaaattcacatattttgtgtgatttatcctac
ttgtcacaagcatatgtattttacaaattatcacaaacccaagttattaatttttctaaa
tttagatctgttcttcaatataacacaacgtcttgtttccttaagactaaaataaaggac
tattttaaaacactaggaatatttcattcggaattaaaacataagaaacttcagagttat
agaataaatcaatggaaaaactggttaagatggcattatcaatacgatttatctcagatt
agatggtctagattaatgccaaaaaaatggcgaactagggttaatcaaagttgtatggct
caaaataaaaatagaaacttaaacaaatggaattcatatgaaaaagaccaattacttcat
tacaaaaaagaaaatgattcggaactctattcattatcaaacgaaaaagataattttaaa
aaatgttatggatatggtcttttagcatataaatcgattaattatgaaaataaaagtgac
tcatttttttctagattaccctttgaagttcaagtaaagaagaacttagaaatttcgtat
aattccaacacgtccaaacacaactttgttgatatgcccggcaatcttcatatcaataat
tatctaagaaagggcaatattctagatagagaaagaaatctcgatagaaaatattttgat
tggaaaattatccatttttctcttagacaaaaaggagatattgaagcctgggttaagatc
gataccaacagtaatccaaatactaaaattggtattaataattatcaaataattgataaa
attgagaaaaagggggttttttatcttacaactcatcaaaatccagaaaaaactcaaaaa
aattcgaaaaaattcttttttgattggatgggaatgaatgaaaaaatatttaatcgtccc
atattgaatctggaattttggttcttcccagaatttgtactactttataatgtctataaa
ataaaaccgtggattataccaagcaaattccttctttttaatttgaatacaaataaaaat
gttagtcaaaataaaaaccaaaacttttttctaccatcaaataaaaaaataaaaataaag
aatcgaagtcaagaagcaaaagaacccccaagtcaaagagagcgtggatcagatatagaa
aacaaaggaaatctgagccctgttttttcaaaacatcaaaccgatcttgaaaaagattac
gtggaatcagacacaaaaaagggtaaaaataaaaaacaatacaaaagcaacacggaagca
gaactagatttgttcttgaaacgttatttgctttttcaattgagatggaacggtgctttg
aatcaaagaatgttcgaaaatatcaaggtatattgtctcctgcttcgactgataaatcca
accaaaattactatatcgtcaattcaaaggagagaaatgagtttggatataatgctgatt
caggcaaatttacctcttacagacttgatgaagaagggggtattgattatcgaacctatt
cggttgtctgtaaaagataatggacaatttattatgtatcaaaccataggtatttcattg
attcataaaagtaaacaccaaactaatcaaagataccgagaacaaagatatgttgataaa
aagaattttgacgaattcattctgcaacctcaaactcaaagaataaatacagaaaaaact
cattttggtttgcttgttcctgaaaatattttatggtctagacgtcgtagagagttgaga
attcgaagtttttttaattcttggaattggaatgtcgtcgatagaaattcagtattttgc
aacgaaaccaatgtaaaaaactggagtcaatttttgggtgaacggaaacccctttataaa
gataaaaatgaattaattaaatttaagttctttttttggcctaattatcgattagaagat
ttagcttgtatgaatcgttattggtttgataccaataatggtagccgtttcagtatctta
aggatacatatgtatccacgattgaaaattaattga

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (91)   
   RefGene (87)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (96)   

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