KEGG   Staphylococcus lutrae: B5P37_00525
Entry
B5P37_00525       CDS       T04991                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
slz  Staphylococcus lutrae
Pathway
slz03410  Base excision repair
slz03430  Mismatch repair
slz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:slz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    B5P37_00525
   03430 Mismatch repair
    B5P37_00525
   03440 Homologous recombination
    B5P37_00525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slz03400]
    B5P37_00525
DNA repair and recombination proteins [BR:slz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     B5P37_00525
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     B5P37_00525
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      B5P37_00525
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 HTH_11 DSPc
Other DBs
NCBI-ProteinID: ARJ49942
UniProt: A0A1W6BJ89
Position
complement(97745..100039)
AA seq 764 aa
MKEMIKSKYKWQTIQNDCKIEQEVSDQFKLTPIMRNILESKGYTTAEQIAQILDCTKQSA
HEPGRLSDMEKVVNRIHTAIQKQEKILVYGDYDADGVTSTTIMVKTLQQLGAVVGWYIPN
RFTEGYGPNELAFKNAYDEGVTLIITVDNGIQGHAEIEMIQQRGVDVIVTDHHEMGDTLP
SAYAIVHPMHPDFDYPFHSLCGAGVALKLAQSLLDDIPKSFWIYAMIGTIADLVSLTDEN
RYIVRQGLKEINLQAPHAIAAILKQAQHQDDITEETIGFIIGPRLNAVGRLDDAALAAEL
LMTEDKEEALFLAEQVEHFNIERKAIVKTIVDEAMLMAEALIQEGQQFLVLANEDWHEGV
LGIVASRIVETFHLPTMVLNIDQHQQHAKGSARSISQVSMFQALSAQQHLITKFGGHHMA
AGLTLPIDQVDALRAALNDWMHNHVKGDELQPIQRVDVVLSTDDITVDQIQSIERLRPFG
TDFNRPVFQVNQLTIQQCKAIGQQQAHLKLTFNEQHLQALFWNQGAFSNELMSGQHLDVT
GTLQINEWNGQRTPQMILTDIKSNERQILDYRSKNKRLPLFDEAARVCFLIHPNRDKQSP
HDYYYGEAIPEMYEKCIMRDLPLTLEDVQLSCRYLNTSQIYLVFQHQRSIYFEGLPQDDE
FKKCYKALYQKGRTDLEKEGLALSQFIHVKPMMLKFILKVFLDLGLISQKNGIIEIVHST
DKQPIRSSRVYQARVQRIEVEKQLLYEEFGAIKSWIENELARNE
NT seq 2295 nt   +upstreamnt  +downstreamnt
gtgaaagagatgattaaatctaaatacaaatggcaaacgatccaaaacgattgtaagatc
gagcaagaggtcagtgaccaatttaaattaacacccatcatgcgaaatattttagaaagt
aaaggctacacgacagctgaacagattgcacaaattttagattgtacaaaacaatccgcg
catgagccggggcgattaagcgacatggaaaaagttgtgaatcgtatacatacagccatt
caaaagcaagagaaaattcttgtatacggcgattacgatgcagacggtgtgacttctaca
acgataatggtaaagacgctacaacaactcggtgcagttgtcgggtggtatattccaaat
cgttttactgaaggatacgggcccaatgaactggcttttaaaaatgcttatgatgaaggc
gtcacacttattatcacagtcgacaacggcattcaaggtcatgcagaaattgaaatgata
caacaacgcggtgtcgatgtgattgtgactgaccatcacgaaatgggtgatacgttacct
tctgcttatgccatcgttcaccctatgcaccctgattttgactatccattccatagttta
tgtggtgcgggagtcgcattaaaattagcacaaagtttattagatgacattccgaaatca
ttctggatttatgccatgattgggacgattgcggatttagtatccttaacggatgaaaat
cgttatatcgttcgtcaaggccttaaagaaatcaatcttcaagcacctcacgcgatagca
gcgattttgaaacaagcgcaacaccaggatgatattactgaggaaacaattggttttatc
attggaccgagattaaatgctgttgggcgacttgatgatgccgcccttgctgctgaacta
ttgatgacagaggacaaggaagaagcattgtttctagctgaacaggtagaacattttaat
attgagcgcaaagctattgtgaagacgattgtagatgaggccatgttgatggctgaggca
ttgattcaagaggggcagcaatttctagtgttagcaaatgaagattggcatgaaggtgtg
cttgggattgtggcttccagaattgtggagacttttcacttgccgacgatggttttaaat
atcgatcaacatcaacaacatgccaaaggttctgctcgaagtatttcgcaagtctctatg
tttcaagcattatcggcacaacaacatttgataactaaattcggtggtcatcatatggca
gccggtttaacactgcctatcgatcaagtagatgccttacgagcagcgcttaatgactgg
atgcacaatcatgtgaaaggggatgaattacaacccatacaacgggttgatgtcgtttta
tcaaccgatgatattacggttgaccaaattcaatctatcgaaagactgcgcccctttggt
acggattttaatagacccgtttttcaagtcaatcagttaacgattcaacaatgtaaagct
ataggtcaacaacaagcacatttaaaattgactttcaatgaacagcatttacaagcgctt
ttttggaatcaaggggcattttcaaatgagttaatgtcaggacaacatttggacgtgact
ggtacattacaaataaacgaatggaatggtcaacgcacgcctcaaatgatattaacagat
ataaaaagtaatgagcgacaaattttagattatcgtagcaaaaataaacgtttaccttta
tttgatgaagcggcacgtgtctgttttctcattcatcctaatcgtgataagcagtctccc
catgattattattatggagaagcgattccagaaatgtatgaaaaatgtatcatgcgtgac
ttgccactcacattggaagatgttcaattatcttgtcgttatttaaatacatcccaaatc
tatctcgtctttcaacatcaacgttcaatttattttgaaggtcttccacaagacgatgaa
tttaaaaaatgttataaagcattgtatcaaaaagggcggactgatttggaaaaagaaggt
cttgcgctcagccaatttattcatgtcaaaccgatgatgttaaaatttattttaaaagtt
tttcttgacttaggactcatttctcaaaaaaatggtataatcgagattgtgcattcgact
gataaacaaccgatacgttcgagtcgtgtttatcaagcacgtgttcaacgtattgaagta
gaaaaacagttattgtatgaagagtttggtgccattaagtcttggatagaaaatgagttg
gcaaggaatgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system