KEGG   Staphylococcus lutrae: B5P37_07140
Entry
B5P37_07140       CDS       T04991                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
slz  Staphylococcus lutrae
Pathway
slz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:slz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    B5P37_07140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slz03021]
    B5P37_07140
   03400 DNA repair and recombination proteins [BR:slz03400]
    B5P37_07140
Enzymes [BR:slz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     B5P37_07140
Transcription machinery [BR:slz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     B5P37_07140
DNA repair and recombination proteins [BR:slz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      B5P37_07140
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 SH3_5 ATP-grasp_6
Other DBs
NCBI-ProteinID: ARJ51092
UniProt: A0A1W6BMI1
Position
1549744..1553295
AA seq 1183 aa
MAGQFVQYGRHRKRRNYARISEVLELPNLIEIQTKSYDWFLKEGLLEMFRDISPIEDFTG
NLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLIIKETGEVKDQEVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYFNEKLDKNGRVNYDATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPLTVLLRALGYSTDQEIIELIGDNEYLRNTLEKDSTENTEQALLEIYERL
RPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKANKKLHLKHRLFNQKLAEPIVNTDTG
EIVAEEGTVLDRRKLDEIMDVLETNANTQVYELQNSIIDEPVEIQSIKVYVPNDDEARTT
TVIGNAFPDSEVKCITPADIVASMSYFFNLLHGIGYTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTDSITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELT
HKRRLSALGPGGLTRERAQMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFG
FIETPYRKVDIETNTITDQIDYLTADEEDSYVVAQANARLDENGRFLDDEIVCRFRGNNT
TMAKEKMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLNPESPFVGTG
MEHVAARDSGAAVISKHRGRVEHVQSSEILVRRLVEENGEEVESVLDRYPLAKFKRSNSG
TCYNQRPIIAKGDIVEKGEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERL
VKDDVYTSVHIEEYESEARDTKLGPEEITRDIPNVSENALKNLDDRGIVYVGAEVKDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREDGDDS
LSPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPL
GVPSRMNIGQVLELHLGMAAKNLGIHVASPVFDGASDEDVWSTIEEAGMARDGKTVLYDG
RTGEPFDNRISVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTYKSDDTVGRVKTYEAIVKGENISRPSVPESFRVLMKELQSLGL
DVKVMDEQDNEIEMRDLDDDDMPDRKVNIQPSSVPESQKEVTE
NT seq 3552 nt   +upstreamnt  +downstreamnt
ttggcaggtcaatttgtccaatatggaagacatcgtaaacgtagaaactacgcaagaatt
tcagaagttttagagttaccaaacttaattgaaattcaaacgaaatcgtacgattggttc
ttaaaagaaggtttgttagaaatgttccgtgatatatctccaattgaagacttcacgggg
aatctttcattagagtttgtagattatagattaggtgaaccaaaatatgatttagaagaa
tctaaaaaccgtgacgcaacgtacgcagcacctttgcgcgtgaaggtgcgtttgatcatt
aaagaaactggagaagtgaaagaccaagaagtatttatgggagacttcccattaatgacg
gaaacaggtactttcgttattaacggggcagagcgtgttatcgtatcacaattagtgcgt
tcaccatctgtttattttaatgaaaaattagataaaaatggacgcgtgaactatgatgcg
accgttattccgaaccgtggtgcttggttggaatacgaaacagatgcgaaagatgtcgtt
tatgtacgtatcgatagaacgagaaagttaccattaactgtgttattacgtgcattaggc
tactcaacagatcaagaaattatcgaattaattggtgataatgagtatttacgcaataca
ttggaaaaagatagtacagaaaatacggaacaagcgttattggagatttacgagcgctta
cgtccaggtgagccaccaactgtagaaaatgcgaaaagcttgttatactctcgtttcttt
gaccctaaacgttacgatttagcaagtgtaggccgatataaagccaacaaaaaactacat
ttgaaacaccgcctattcaaccagaaactagcagaaccgattgtgaatacggatacaggt
gaaattgttgctgaagaaggcacagtactggatcgtcgtaaattagacgaaatcatggat
gtactcgaaacaaatgcgaatacacaagtttatgaacttcaaaacagcattattgatgag
ccagtggaaattcaatccattaaagtgtatgtccctaatgatgatgaagcgcgtacaacg
acagtgattggtaatgcgttcccagattcagaagtgaaatgtattacaccggcagatatt
gttgcgtctatgtcttacttctttaatttattgcatggtattggttacacagacgatatc
gaccaccttggtaatcgtcgtctacgctcagtcggtgagttgttacaaaaccaattccgc
attggtttgtcaagaatggagcgtgtcgtgcgtgaaagaatgtcaatccaagacacagat
tcgattacaccacaacaattaatcaatattcgtccagtcattgcatcgattaaagagttt
tttggtagttctcaattatcacaattcatggaccaagcgaacccacttgctgaattaaca
cataagcgtcgtctatctgccttagggccaggtggtttaacgcgtgaacgtgcacaaatg
gaagtgcgtgacgtccattactcccactacgggcgtatgtgtccaattgaaacaccagag
ggtccgaatattggtttgatcaactcattatcaagttatgcgcgtgtcaatgagtttggt
tttatcgagacaccgtaccgaaaagtagatattgagacaaatacgattacagaccaaatc
gattacttaactgctgatgaagaagacagttatgttgtcgctcaggcgaatgcacgtctc
gatgaaaatggtcgtttcttagacgatgagattgtgtgtcgtttccggggtaataacaca
acaatggccaaagaaaaaatggattacatggacgtttcacctaagcaggttgtttctgcg
gcgacagcatgtattccgttcttagaaaacgatgactcaaaccgtgccttaatgggtgcg
aacatgcaacgtcaagctgtgccattgctcaacccagaatctccatttgttggaacagga
atggagcatgttgcggcacgtgattcaggggcagctgtgatttctaaacatcgtggacgt
gtagaacatgttcagtcgagtgaaattttggtgcgtcgtttagtagaagaaaatggtgaa
gaagtagaaagcgtattggatcgttatccgttagcgaaattcaaacgttcgaactcagga
acatgttacaaccaacgcccgattattgcgaagggtgatatcgtagaaaaaggtgaaatt
ctagccgatggtccatctatggaactgggtgaaatggcacttggacgtaacgtcgttgtc
ggattcatgacttgggacggttataactatgaggatgccgttatcatgagtgaacgtctt
gtcaaagatgatgtctacacttctgttcatattgaagagtatgaatctgaagcgcgtgac
acgaaacttggaccggaagaaatcacacgtgatattccaaacgtatcggaaaatgcactg
aaaaacttagacgatcgcggtattgtttatgtcggtgcagaagttaaagatggtgacatt
ttagtaggtaaagttacgccaaaaggtgtaacagaattaaccgctgaagagcgtttgtta
catgctatttttggtgaaaaagcacgtgaagttcgtgatacgtcattacgtgttccacat
ggtgcgggaggtattgtccttgacgtaaaagtgttcaatcgtgaagacggtgatgattca
ctttcaccaggtgtaaaccaattagtccgtgtttacattgtacaaaaacgtaaaatccac
gtaggagacaaaatgtgtggtcgtcacggtaacaaaggtgtcatctctaaaattgtacct
gaagaagatatgccatatttaccagatggtcgaccgattgatattatgttgaacccactt
ggtgtaccatcacgtatgaatatcggacaagtactcgagcttcatttaggtatggccgct
aaaaacttaggcatccatgttgcgtcaccagtatttgatggtgccagcgatgaagatgta
tggtcaacaattgaagaagcaggtatggcacgtgacggtaaaaccgtactttatgatggc
cgtactggtgaaccattcgacaaccgtatctcagtgggtgtgatgtacatgttgaaactt
gcgcacatggtagacgataaactacacgcacgttcaactggaccgtactcattagtgaca
caacaaccactcggtggtaaagcacagtttggtggtcaaagatttggtgagatggaggta
tgggcacttgaagcatatggtgcagcatacacattacaagagattctcacatacaaatca
gatgacacggtaggtcgtgtgaaaacttatgaagccatcgttaaaggtgagaacatctca
agacctagcgttccagaatcattccgcgtgttgatgaaagaattacaaagtttaggtctc
gatgttaaagtgatggatgaacaagataatgaaattgaaatgcgcgatttagatgatgat
gatatgccagatcgcaaagttaatattcaaccttcaagtgttccagaatcacaaaaagaa
gtgactgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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