KEGG   Streptomyces avermitilis: SAVERM_1212
Entry
SAVERM_1212       CDS       T00126                                 
Symbol
phrB
Name
(GenBank) putative deoxyribodipyrimidine photolyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
sma  Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:sma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sma03400]
    SAVERM_1212 (phrB)
Enzymes [BR:sma01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     SAVERM_1212 (phrB)
DNA repair and recombination proteins [BR:sma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    SAVERM_1212 (phrB)
 Prokaryotic type
    SAVERM_1212 (phrB)
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-ProteinID: BAC68922
NITE: SAV1212
UniProt: Q82NS9
Position
1503492..1504865
AA seq 457 aa
MNVSVVLFTSDLRLHDHPPLRAALDGARQVVPLFVRDRAVDGAGFAAPNRLAFLADCLRD
LDAGLRERGGRLVLRSGDVVDQVCKVAAEADADEVHLAAGVSAYAHRREQRLRSALEADG
RRLHVHETVITAVAPGAVTPSSSDHFAVFTPYFRHWEREHLRDALGAPRGVRVPESVGSE
RLPTRTELSGLSQGLAAGGEEEGRKRLMAWLRGGITAYEDRHDDLAGDATSHLSPHLHFG
TLSPVELVHRARRTGGPGAEAFVRQLAWRDFHYQVLAARPDAATADYRGRGDRWRSEAAA
REEVEAWRTGRTGYPVIDAAMRQLRHEGWMHNRGRLLTASFLTKTLYVDWRVGARHFLEL
LVDGDVANNQLNWQWMAGTGTDTRPNRVLNPVTQAKRYDPDGAYVRRWVPELEGLRGAAV
HEPWKLKGLDRAAYDYPDPIVELADGLARFRHARGRD
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgaacgtctcggtcgtcctgttcacctccgacctgcgtctgcacgaccatccgccgctg
cgggcggccctggacggcgcgcgtcaggtggtgcccctgttcgtgcgcgaccgggccgtc
gacggggccgggttcgccgcccccaaccggctggcgttcctcgccgactgtctgcgagac
ctcgacgccgggctgcgcgagcgcggcgggcgactggtgctccgctccggcgacgtggtc
gaccaggtgtgcaaggtggcggccgaggcggacgccgacgaggtgcatctggcggccggg
gtcagcgcgtacgcccaccggcgcgagcagcggctgcggtcggccctggaggcggacggg
cgtcgactgcacgtccacgagacggtgatcaccgcggtggcgccgggtgccgtcaccccg
tcctcctcggaccacttcgccgtcttcaccccgtacttccggcactgggagcgggagcat
ctgcgcgacgcgctcggcgcgccgcgcggcgtgcgggtgccggagagcgtgggctcggaa
cggcttcccacccgcacggaactgtccggactgtcgcaggggctggcggcgggcggcgag
gaggagggcaggaagcggctcatggcctggctgcgcggcggcatcacggcgtacgaggac
cgccatgacgacctggccggcgacgccacttcccacctctccccccacctgcacttcggc
acgctgtcccccgtcgaactcgtccaccgggcgcggcggacgggcggccccggcgccgag
gccttcgtacggcagctcgcgtggcgcgacttccactaccaggtgctggccgcacggccc
gacgcggccaccgcggactaccgcggccgcggcgaccgatggcggtccgaggccgcggcg
cgggaggaggtcgaggcgtggcggacgggccgcaccggctacccggtgatcgacgcggcg
atgcgccaactgcggcacgagggctggatgcacaatcgtggccgtctgctgaccgcgagc
ttcctcaccaagacgctgtacgtggactggcgggtcggcgcccgccacttccttgagctg
ctggtggacggcgatgtcgccaacaaccagctcaactggcagtggatggccggaaccggc
accgacacccggcccaaccgtgtcctcaatccggtcacccaggccaagcggtacgacccg
gacggcgcgtacgtccggcgctgggtgccggaactcgaaggactccggggagcggccgtg
cacgagccctggaagctcaagggactcgaccgcgccgcgtacgactaccccgacccgatc
gtcgaactcgccgacggtctggcccgcttccggcacgcccgcggacgcgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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