KEGG   Streptomyces avermitilis: SAVERM_1790
Entry
SAVERM_1790       CDS       T00126                                 

Gene name
arcB1
Definition
(GenBank) putative ornithine cyclodeaminase
  KO
K01750  ornithine cyclodeaminase [EC:4.3.1.12]
Organism
sma  Streptomyces avermitilis
Pathway
sma00330  Arginine and proline metabolism
sma01100  Metabolic pathways
sma01110  Biosynthesis of secondary metabolites
sma01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:sma00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    SAVERM_1790 (arcB1)
Enzymes [BR:sma01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.1  Ammonia-lyases
    4.3.1.12  ornithine cyclodeaminase
     SAVERM_1790 (arcB1)
SSDB
Motif
Pfam: OCD_Mu_crystall F420_oxidored GFO_IDH_MocA
Other DBs
NCBI-ProteinID: BAC69501
NITE: SAV1790
UniProt: Q82M70
Position
complement(2186588..2187568)
AA seq 326 aa
MTDDDVLYLSSRRVTELLDTDAAIASQRAAFTALGDGTAELPGKIMYPSRFDDSVVFAYV
SRLSADTGTVAKFGSVNPGNPAAGLASVHAVINALDPVTGRLVAVMDGTAVTTLRTAAAS
AVAFDALATADASELGLLGSGTQALAHARAVARVRDLRSVRVWSPNPGRREQAAQRLAAE
LGVAAKGVDTAEEAVAQVPMVAACTLSRTPVVRGEWLAPGCTVVSVGSFEPTRSEVDAEV
LRRAAAVVVDDPGTAADHAGPVVDALRERRLAPDDLIPLGAVVTGRHTARTSPGDIVFYN
SVGLGIQDAAAAWAVIAAARGPREHP
NT seq 981 nt   +upstreamnt  +downstreamnt
atgaccgacgacgacgtcctctacctctcctcgcgccgcgtgacggaactgctggacacc
gacgcggcgatcgcctcgcagcgcgccgcgttcaccgcgctcggcgacggcaccgccgag
ctccccggcaagatcatgtaccccagccggttcgacgacagtgtcgtcttcgcgtacgtc
tcgcggctgtccgcggacaccgggaccgtcgccaagttcggcagcgtcaatcccgggaac
ccggccgcaggtctggccagcgtccacgcggtgatcaacgcgctcgacccggtgaccggc
cggctcgtggccgtcatggacggtacggcggtcaccacactgcggaccgccgccgcgagc
gccgtcgccttcgacgcgctggccaccgccgacgcctccgagctgggccttctcggctcc
ggcacccaggcactcgcccatgcgcgggccgtcgcccgggtgcgggacctcaggtccgta
cgcgtctggagcccgaaccccggccgccgcgagcaggcggcccagcggctcgccgccgaa
ctcggtgtcgccgccaagggtgtcgacaccgccgaggaagccgtggcccaagtgcccatg
gtcgccgcctgcacactgagcaggacgccggtcgtacgcggcgagtggctcgcgccgggg
tgcacggtggtgagcgtgggttccttcgagccgacccgcagcgaggtcgacgccgaggtg
ctgcggcgggccgcggcggtggtcgtcgacgatccggggaccgcggccgaccacgcggga
ccggtggtggacgcgctgcgggagcggcggctcgccccggacgacctgatcccgctcggc
gccgtggtcaccggccggcacaccgcgcggacgagccccggcgacatcgtcttctacaac
agcgtcggactcggcatccaggacgcggcggcggcctgggccgtgatcgccgcggcccgc
ggaccacgggagcacccatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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KEGG   Streptomyces avermitilis: SAVERM_3645
Entry
SAVERM_3645       CDS       T00126                                 

Gene name
arcB2
Definition
(GenBank) putative ornithine cyclodeaminase
  KO
K01750  ornithine cyclodeaminase [EC:4.3.1.12]
Organism
sma  Streptomyces avermitilis
Pathway
sma00330  Arginine and proline metabolism
sma01100  Metabolic pathways
sma01110  Biosynthesis of secondary metabolites
sma01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:sma00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    SAVERM_3645 (arcB2)
Enzymes [BR:sma01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.1  Ammonia-lyases
    4.3.1.12  ornithine cyclodeaminase
     SAVERM_3645 (arcB2)
SSDB
Motif
Pfam: OCD_Mu_crystall GFO_IDH_MocA Shikimate_DH
Other DBs
NCBI-ProteinID: BAC71357
NITE: SAV3645
UniProt: Q79Z74
Position
complement(4516629..4517633)
AA seq 334 aa
MLILRRADVTDVLSGRETEIIDLVAETYRLHDEGQTSLPHSTFLRFPEEHHSRDRIIGLP
AYRGGERPVAGMKWISSFPGNVAAGTDRASAAVVLNSLGNGHPVAFVEGAVISAKRTAAS
AALAARELTADNPPAAALLIGCGVINLEILRFLAAALPDLREAALYDTDPARAEAFAARC
AEEVPGVKARPVTDLAAALGEHRLVSLATTAATPHMDLSACGPDTTVLHISLRDLTAEAV
LGAVNVVDDADHVCRERTSLDLAQQATGNRDFVAAPIGALLRGTATLRRTADRPVVYSPF
GLGVLDLALAEFVREEADRRGLGVRVEDFLPAFA
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgctgattctccggcgcgccgatgtgacggacgtcctgtccggccgggagacggagatc
atcgacctcgtcgccgagacctaccggctgcacgacgaggggcagacgtccctgccgcac
tcgacgttcctgcgtttccccgaggagcaccacagccgggaccggatcatcggcctgccg
gcctaccggggcggtgagcggcccgtcgccggaatgaagtggatctcctccttccccggc
aacgtggccgccggcaccgaccgggccagcgccgccgtcgtcctcaactccctcggcaac
gggcacccggtggcgttcgtcgagggtgcggtgatctccgcgaagcgcaccgccgcgagc
gcggcgctcgccgcccgggaactcaccgcggacaacccgcccgccgccgcgctgctgatc
ggctgcggtgtgatcaacctggagatcctgcgcttcctggccgccgccctgccggacctg
cgcgaggccgccctgtacgacacggacccggcccgcgccgaggccttcgccgcacggtgc
gccgaggaggtccccggggtgaaggcccgtccggtgaccgacctggccgccgcgctcggc
gagcaccgcctcgtctccctcgccaccaccgccgcgaccccgcacatggacctgtcggcg
tgcggcccggacaccaccgtgctgcacatctccctgcgggacctgaccgccgaggccgtc
ctcggggcggtcaacgtcgtcgacgacgccgaccacgtgtgccgcgagcgcacctccctc
gacctcgcccagcaggccaccggcaaccgtgacttcgtcgccgccccgatcggcgccctg
ctgcgcggcacggccacgctccgccgcaccgcggaccggcccgtcgtctactccccgttc
ggtctgggcgtgctcgacctggcgctcgccgagttcgtgcgcgaggaggccgaccggcgc
ggcctcggcgtacgcgtcgaggacttcctgcccgcctttgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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KEGG   Streptomyces avermitilis: SAVERM_5617
Entry
SAVERM_5617       CDS       T00126                                 

Gene name
arcB3
Definition
(GenBank) putative ornithine cyclodeaminase
  KO
K01750  ornithine cyclodeaminase [EC:4.3.1.12]
Organism
sma  Streptomyces avermitilis
Pathway
sma00330  Arginine and proline metabolism
sma01100  Metabolic pathways
sma01110  Biosynthesis of secondary metabolites
sma01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:sma00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    SAVERM_5617 (arcB3)
Enzymes [BR:sma01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.1  Ammonia-lyases
    4.3.1.12  ornithine cyclodeaminase
     SAVERM_5617 (arcB3)
SSDB
Motif
Pfam: OCD_Mu_crystall Glu_dehyd_C Shikimate_DH
Other DBs
NCBI-ProteinID: BAC73329
NITE: SAV5617
UniProt: Q82BT7
Position
complement(6794587..6795618)
AA seq 343 aa
MTMPDASTTAAAEPIPRADRHLRILSTGDLAGIDISLADVVSTVEDAYRTLHAGESDNPR
KLTVKPRDGHSVAYAMLGRDGSRDVVAVKTSYKHGLDKGREEQHYYTTLTLYDDVTGLPV
AMMDCSRIGSLRTPAVSALLARECAAPGARSALVIGTGTQGRLALPFLLTTLPGLDRLML
FGTHPEGVTAVRERLRAHFPDRDVEIVTDAGAAASEADIIVATAGGHTPAAVGADRLKPG
SLSILVGHGLAPSALHRADRVIATSEAQMKVTGIDMADADGELRAVDAEFPPVITGDTAG
RRTATERIFAYNSGLVVTDIALGHRFAQLALEQGLGTEVALWR
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgaccatgcctgacgcctcgaccaccgccgccgccgaaccgataccccgcgccgaccgg
cacctgcggatcctctcgaccggcgatctggccgggatcgacatctccctggccgacgtg
gtgtccaccgtggaggacgcctaccgcaccctgcacgccggtgagtccgacaacccccgc
aagctcaccgtcaagccgcgggacgggcattcggtcgcgtacgcgatgctcggccgggac
ggctcccgcgacgtcgtcgccgtcaagacctcctacaagcacggcctggacaaggggcgc
gaggagcagcactactacaccacgctgaccctctacgacgatgtcaccgggctgcccgtg
gcgatgatggactgctcccggatcggatcgctgcgcaccccggcggtctccgcgctgctg
gcccgcgaatgcgccgcccccggtgcgcgcagcgccctggtcatcggtacgggcacccag
ggccgtctggcgctgcccttcctgctgacgacgctgcccgggctggaccggctgatgctc
ttcggcacccaccccgagggcgtcaccgcggtgcgcgagcggcttcgggcgcacttcccg
gaccgggacgtggagatcgtcaccgacgcgggggccgcggcctcggaggccgacatcatc
gtggccacggccggcggccacaccccggccgcggtcggggcggaccggctcaagccgggc
tccctgtccatcctcgtgggccacggtctcgccccgtcggccctgcaccgggccgaccgg
gtgatcgccaccagcgaggcccagatgaaggtcaccggcatcgacatggccgacgccgac
ggcgaactccgcgcggtcgacgccgagttcccgcccgtgatcaccggcgacaccgcgggc
cgccgcaccgcgacggagcggatcttcgcctacaacagcggactcgtcgtcaccgatatc
gcgctggggcaccgcttcgcacagctcgccctcgaacagggcctgggcaccgaggtggca
ctgtggcggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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