KEGG   Streptomyces avermitilis: SAVERM_4150Help
Entry
SAVERM_4150       CDS       T00126                                 

Gene name
dnaZX
Definition
(GenBank) putative DNA polymerase III gamma and tau subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
sma  Streptomyces avermitilis
Pathway
sma03030  DNA replication
sma03430  Mismatch repair
sma03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAVERM_4150 (dnaZX)
   03430 Mismatch repair
    SAVERM_4150 (dnaZX)
   03440 Homologous recombination
    SAVERM_4150 (dnaZX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sma03032]
    SAVERM_4150 (dnaZX)
   03400 DNA repair and recombination proteins [BR:sma03400]
    SAVERM_4150 (dnaZX)
Enzymes [BR:sma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SAVERM_4150 (dnaZX)
DNA replication proteins [BR:sma03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SAVERM_4150 (dnaZX)
DNA repair and recombination proteins [BR:sma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SAVERM_4150 (dnaZX)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N Rad17 AAA_30 AAA_22 AAA_16 AAA_14 AAA_5 zf-CXXC Mg_chelatase T2SSE TsaE AAA_19 AAA_18
Motif
Other DBs
NCBI-ProteinID: BAC71862
NITE: SAV4150
UniProt: Q82FV2
Position
complement(5092430..5094970)
Genome map
AA seq 846 aa AA seqDB search
MSSLALYRRYRPESFAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEQGPTPTPCGACQSCQDLARNGPGSIDVIEIDAASHGGVDDARDLREKAFFGPAGS
RYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLREYLGDVCGRENIPVADGVLPLVVRAGGGSVRDSMSVMDQLLAGAGADGVTYAMA
TSLLGFTDGSLLDSVVEAFASGDGAAAFEVVDRIIEGGNDPRRFVADLLERLRDLVILAA
VPDAGEKGLIDAPADVVERMQAQAGVFGAAELSRAADLVNEGLTEMRGATSPRLQLELIC
ARVLLPAAYGDDRSLMARLDRLERGVNFSGGGAGPAMGYVPGPGAHGGASVPQMSQPAQT
PQVPQMPQMSQGSYAQQAPQVPPGGGVDAARAAVRGGPGGAGGPAAGQGVPGAEAAYGDV
DAGVAGSGAASAPVQEAPAEAAPPASQPTAEQPQPQPPAQPQPHTQPQAPAAAPAPAPGA
WPTASAAGSGRRPGGWPTATPAGGGQPQTPAAAASAAPPASGPAPASAPAPSAPAPAPAA
AYAPAAGGPDPRMLWPNILEAVKNRRRFTWILLSQNAQVTGFDGTTLQIGFVNAGARDNF
ASSGSEDVLRQALAEQFNVQWKIEAVVDPSGGSAQAAGGGSGPRVRRRRCRVQRGRRLRL
RRRVRRSSGRPAPRAAAVRPTGAGPRRVGGSGPVRQTDCARPGIHTTARSATAHRPRGRH
GGGRRPRPRRVRPLGPRTDRPGARGDGDGGVLPRVRAPAAARRGGVWLAASRMSHSPRPF
LARPFD
NT seq 2541 nt NT seq  +upstreamnt  +downstreamnt
gtgtcgtctctcgcgctgtaccgccgctatcgcccggagtcgttcgccgaggtcatcggg
caggagcatgtcaccgacccgctgcagcaggcgctgcggaacaaccgggtcaatcacgcg
tacctgttcagcggtccgcgcggatgcgggaagaccaccagcgcacgcatcctggccagg
tgcctgaactgcgagcaggggcccacgcccaccccctgcggcgcatgccagtcctgccag
gacctcgcgaggaacgggccgggatcgatcgacgtcatcgagatcgacgccgcttcgcac
ggtggtgtggacgacgcgcgtgacctgcgggaaaaggccttcttcggaccggcgggcagc
cggtacaagatctacatcatcgacgaggcccacatggtcacgtcggccggtttcaacgcg
ctcctcaaggtcgtcgaggagccgccggagcatctgaagttcatcttcgcgaccaccgag
cccgagaaggtcatcggaaccatccgttcgcggacccatcactatcccttccggctcgtg
ccgcccgggacccttcgggagtacctcggcgacgtgtgcgggcgggagaacatccccgtc
gcggacggggtgctgccgctcgtggtgcgcgccggcggcggttccgtacgtgactccatg
tccgtcatggaccagctgctcgcgggagcgggcgccgacggtgtgacgtacgccatggcc
acctcgctcctcgggttcacggacgggtcgctgctcgactcggtggtcgaggcgttcgcg
tcgggcgacggagccgcggccttcgaggtcgtggaccggatcatcgaggggggcaacgat
ccgcggcggttcgtcgccgacctgctggagcggctgcgggacctggtgatcctggccgcc
gtgcccgacgcgggcgagaaggggctcatcgacgctcccgccgatgtcgtggagcggatg
caggcccaggccggggtcttcggcgccgccgaactcagccgggccgccgacctcgtcaat
gaggggctgacggagatgcggggcgccacttcgccccggctccagctcgaactcatctgc
gcgcgcgtgctgctgccggcggcgtacggcgacgaccgttcgctcatggcccggctggac
cggctggagcgcggcgtcaacttctccggcgggggtgcggggccggccatggggtacgtg
cccgggcccggcgcgcacggcggggcttcggtgcctcagatgtctcagccggcccagacg
cctcaggtgccgcagatgcctcagatgtcccaggggtcttacgcccagcaggccccccag
gtgccgccggggggcggagtcgatgcggctcgggccgcggtgcggggcgggcccggtggg
gcgggcggtcctgccgccgggcagggcgtaccgggtgcggaggccgcgtacggggatgtc
gacgccggggtggccggctcgggcgcggcttcggcgcccgtccaggaggcgcccgcggag
gctgcgccgcccgcttcccagccgaccgctgagcagccccagccccagccaccggcacag
ccacaacctcatacccagccgcaggctcccgccgccgcgcccgcgcccgcaccgggagcc
tggcccaccgcgagcgccgcgggcagcggccggcgtccgggtggctggccgacggccacg
cccgcgggcgggggacagccgcagactccggccgccgctgcctctgccgctccccccgct
tccggccctgccccggcttccgctccggcgccctcagccccggcgcccgctcccgccgcg
gcctacgccccggctgccggtgggcccgacccccgcatgctctggccgaacatcctggag
gcggtgaagaaccggcgccgcttcacctggatcctgctcagccagaacgcgcaggtcacg
ggtttcgacggcacgacgctccagatcggcttcgtcaacgcgggcgcgcgggacaacttc
gcgagcagcggcagcgaggacgtactgcggcaggcgctggccgagcagttcaacgtgcag
tggaagatcgaggcggtcgtcgacccgtcgggcggttcggcccaagcggcgggcgggggc
tccggcccccgggttcggcggcggcggtgccgggttcaacgcgggcggcggctccggctt
cggcggcgggtacggcggagctccggccgccccgcgccccgcgccgcagcagtccgcccc
accggcgccgggccccgccgcgtcggtggctccggccccgtccgccagacagactgcgcc
cgccccggcatccacaccaccgcccgctccgccacggcacatcgcccccgaggacgacat
gggggaggacgacgaccccgacctcgacgagtccgccctctcgggccacgaactgatcgt
ccgggagctcggggcgacggtgatggaggagttctcccacgagtaagggcgccggcagcg
gcccggcgaggaggggtgtggctcgcggcgtcgcggatgtcccacagcccccgcccgttc
ctcgcccgacccttcgactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (30)   

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