KEGG   Streptomyces avermitilis: SAVERM_4319
Entry
SAVERM_4319       CDS       T00126                                 
Symbol
recF
Name
(GenBank) putative DNA recombination and repair protein
  KO
K03629  DNA replication and repair protein RecF
Organism
sma  Streptomyces avermitilis
Pathway
sma03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SAVERM_4319 (recF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sma03400]
    SAVERM_4319 (recF)
DNA repair and recombination proteins [BR:sma03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SAVERM_4319 (recF)
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_21 AAA_15 AAA_29 AAA_33 SbcC_Walker_B ABC_tran AAA
Other DBs
NCBI-ProteinID: BAC72031
UniProt: Q82FD5
Position
5291312..5292433
AA seq 373 aa
MHVTHLSLADFRSYARVEVPLDPGVTAFVGPNGQGKTNLVEAVGYLATLGSHRVSSDAPL
VRMGAERAIIRAQVRQDERRQLVELELNPGKANRARINRSSQVRPRDVLGIVRTVLFAPE
DLALIKGDPGERRRFLDELITARSPRMAGVRSDYERVLKQRNTLLKTAALARRHGGRSMD
LSTLDVWDQHLARAGAELLAQRLDLIAALQPLADKAYEQLAPGGGPIALEYKPSAPGEAH
TRDALYEQLMAALAEARKQEIERGVTLVGPQRDELLLKLGQLPAKGYASHGESWSYALAL
RLASYDLLRAEGNEPVLVLDDVFAELDTRRRERLAELVAPGEQVLVTAAVDDDVPGVLAG
TRYTVSEGTVERV
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgcacgtcacgcatctgtcgctggccgacttccgctcgtacgcccgggtcgaggtcccg
ctcgacccgggcgtcaccgccttcgtgggacccaacgggcagggcaagacgaacctcgtc
gaggcggtcggctatctcgccaccctcggcagccaccgggtctcgtccgacgcgcccctg
gtccgcatgggcgccgaacgcgcgatcatccgggcccaggtccggcaggacgagcgccgg
cagctcgtcgagctggagctgaacccgggcaaggccaatcgcgctcgcatcaacaggtcc
tcgcaggtcagaccccgtgacgtgctgggcatcgtacgtactgtcctgttcgccccggag
gacctcgcgctgatcaagggcgaccccggggagcggcgccgtttcctcgacgagctgatc
accgcccgctccccgcgcatggccggcgtccgttccgactacgagcgggtcctcaagcag
cgcaacaccctcctcaagacggccgcgctggcccgccggcacggcggccgttccatggat
ctgtccaccctcgacgtgtgggaccagcacctcgcccgcgccggcgccgaactgctcgcc
cagcgcctggacctgatcgccgcgctccagccgctcgccgacaaggcgtacgaacagctg
gcacccggcggcggcccgatcgccctggagtacaagccgtccgccccgggtgaggcccac
acgcgggacgccctctacgagcagttgatggccgcgctcgccgaggcccgcaagcaggag
atcgagaggggcgtcaccctggtgggtccccaacgtgacgaacttctcctcaagctcggc
cagcttccggcaaagggatacgcgtcacacggcgagtcctggtcgtacgcgctggcgctg
cgcctggcgtcgtacgacctcctgcgcgccgaggggaacgagccggtgctcgtcctcgac
gacgtcttcgccgagctggacacccgcagaagagagcgcctcgcggaactcgtcgccccg
ggagagcaggtgctggtgaccgccgcggtcgacgacgacgtgccgggggtcctggcggga
acgcggtacaccgtgtccgaggggaccgtggagcgcgtatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (13)   

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