KEGG   Streptomyces avermitilis: SAVERM_5170
Entry
SAVERM_5170       CDS       T00126                                 
Symbol
rphA
Name
(GenBank) putative ribonuclease PH
  KO
K00989  ribonuclease PH [EC:2.7.7.56]
Organism
sma  Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:sma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sma03016]
    SAVERM_5170 (rphA)
Enzymes [BR:sma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.56  tRNA nucleotidyltransferase
     SAVERM_5170 (rphA)
Transfer RNA biogenesis [BR:sma03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SAVERM_5170 (rphA)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: BAC72882
NITE: SAV5170
UniProt: Q82D17
Position
6277137..6277871
AA seq 244 aa
MSRIDGRTPEQLRPITIERGWSKHAEGSVLVSFGDTKVFCTASVTEGVPRWRKGSGEGWV
TAEYSMLPRATNTRGDRESVRGKIGGRTHEISRLIGRSLRAVIDYKALGENTIVLDCDVL
QADGGTRTAAITGAYVALADAVAWAQGRKLVKAGRKPLTGTVSAVSVGIVGGVPLLDLCY
EEDVKADTDMNVVCTGDGRFVEVQGTAEAEPFDRKELNALLDLAVSGCDELAVIQRAALE
ATTR
NT seq 735 nt   +upstreamnt  +downstreamnt
atgtctcgaatcgacggccgcacgcccgaacagctccgccccatcaccatcgagcgcggc
tggagcaagcacgccgagggctccgtcctcgtctccttcggcgacacgaaggtcttctgc
accgcctccgtcaccgaaggcgtcccgcgctggcgcaagggcagcggcgaaggctgggtc
accgccgagtactccatgctcccgcgcgccaccaacacccgcggcgaccgcgagtcggtc
cggggcaagatcggcggccgtacgcacgagatcagccgtctgatcggccgctccctgcgc
gcggtcatcgactacaaggcgctcggcgagaacacgatcgtcctcgactgcgacgtcctc
caggccgacggcggcacccgcacggccgcgatcacgggcgcgtacgtcgccctcgccgac
gcggtcgcctgggcccagggccgcaagctcgtgaaggcgggccgaaagccgctcaccggc
acggtcagcgcggtctcggtgggcatcgtgggcggggtgccgttgctggacctctgctac
gaggaggacgtgaaggccgacaccgacatgaacgtcgtctgcaccggcgacggccgcttc
gtcgaggtccagggcaccgccgaggcggaacccttcgaccgcaaggagctcaacgccctt
ctcgacctggcggtttcgggctgcgacgaactggcggtgatccaacgtgcggccctggag
gcaaccacacgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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