KEGG   Streptomyces avermitilis: SAVERM_6875
Entry
SAVERM_6875       CDS       T00126                                 
Symbol
priA
Name
(GenBank) putative primosomal protein
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
sma  Streptomyces avermitilis
Pathway
sma03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SAVERM_6875 (priA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sma03400]
    SAVERM_6875 (priA)
Enzymes [BR:sma01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SAVERM_6875 (priA)
DNA repair and recombination proteins [BR:sma03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SAVERM_6875 (priA)
SSDB
Motif
Pfam: PriA_3primeBD
Other DBs
NCBI-ProteinID: BAC74586
NITE: SAV6875
UniProt: Q827P9
Position
8204328..8206490
AA seq 720 aa
MSSENGQGGGGGEEAPPEQLALIREAVRKAKVPKAKPRTWRGAALAKELPVARVLVDKGV
LHLDRYFDYAVPEELAAVAQPGVRVRVRFGAGGRTVRDGRREGGSLIDGFLVERVAESDY
GGPLAALAQVVSPEPVLGPELLGLARAVADRYAGSLADVLQLAVPPRHGRAEAGKTAEPL
PAPPAPEPGSWRRYARGAEFVKSLAAGGSPRAVWTALPGPDWAEEIARAVQATLASGRGA
LVVVPAGRPAARVDAALRALMGEGRHALLTADAGQERRYREWLAVRRGAVQAVVGTRAAM
FAPVRNLGLVVVWDDGDASHSDDNAPFPHVREVLELRATRDKCGFLLGSWSCTVEAAQLV
ESGWAAPLVAEREQVRAAAPLVRTVGDGDLARDEAARAARLPTLAWQAVREGLRHGPVLV
QVPRRGYVPRMACAQCRAPARCRHCAGPLEAHDAGALRCGWCGREDAAWHCPECGGFRLR
AQVVGARRTAEELGRAFPAVPVRTSGREQVLDTVSGAPALVVSTPGAEPVAEGGYAAALL
LDGWAMLGRPDLRAGEEALRRWIGAAALVRGQAAGGTVVVVAEPTLRPVQALVRWDPVGH
AVRELAERAELGFPPVSRMAAVSGTAEAVAGFLSGVELPSDAEVLGPVPLPVTEAGRPRR
VGGPPPGERWERALVRVPPGSGAALAGALKTAQAARMARGGGGNGSEAPVRIRIDPPDIG
NT seq 2163 nt   +upstreamnt  +downstreamnt
gtgagcagcgagaacgggcaggggggcggcggtggcgaagaggcgccgccggagcagctt
gcgttgatccgtgaggccgtgcggaaggccaaggtgcccaaggccaagccgcggacgtgg
cggggagccgcgctggccaaggagttgcccgtcgcgcgtgtgctggtcgacaagggcgta
cttcatcttgatcggtacttcgactatgccgtgcccgaggaactggctgccgtcgctcag
ccgggagtgcgcgtccgtgtgcggttcggagccggcgggcgcaccgtgcgggacggcagg
cgggagggcggctcactgatcgacggcttcctcgtcgagcgggtcgccgagtccgactac
ggcgggccgctggccgcgctcgcgcaggtcgtgtcccccgagcccgtgctcggccctgag
ctgctcgggctcgcccgggccgtcgccgaccggtacgccgggagcctcgccgatgtgctc
cagctggccgttccgcccaggcacgggcgggccgaggccggcaagacggccgagccgctg
ccggctcctcccgcgcccgaacccggctcctggcggcggtacgcgcgcggggcggagttt
gtgaagtccctcgccgccgggggttcgccccgggccgtgtggaccgcgttgccggggccc
gactgggccgaggagatcgcccgggccgtgcaggccacgctcgcctcggggcgcggcgcg
ctcgtcgtcgtgccggccggacggcccgccgcgcgcgtcgacgcggcgctccgcgcgctg
atgggtgaggggcggcatgcactgctgaccgccgacgcggggcaggagcggcgctaccgg
gagtggctggccgtgcggcggggggccgtgcaggcggtggtcgggacgcgggccgcgatg
ttcgcgcccgtgcggaatctcgggctcgttgtcgtgtgggacgacggggatgcttcccac
agcgacgacaacgcgccgtttccccatgtgcgggaggtgctggagcttcgggcgacccgg
gacaagtgcgggtttctgctggggagctggagctgcacggtggaggccgcgcagcttgtc
gagagcgggtgggcggcaccgctcgtggccgagcgggaacaggtacgggcggctgctcct
ctcgtgcgcaccgtgggggacggggatctcgcgcgggacgaggcggcccgggccgcgcgg
ctgccgaccctcgcctggcaggccgtgcgggaggggctgcgccacggacccgtgctggtg
caggtgccccggcggggttacgtgccccggatggcctgcgcgcagtgccgggcgcccgcg
cggtgccggcactgcgcggggccgctggaggcgcacgacgccggggcgctgcggtgcggt
tggtgcggacgggaggacgcggcttggcactgtccggagtgcggtgggttccggttgcgg
gcgcaggtcgtgggggcgcggcggaccgccgaggagctgggtcgtgcgttcccggccgtg
ccggtgcgcacctccgggcgtgagcaggtgctcgacaccgtctcgggggcgcccgcgctc
gtggtgagtacgccgggggccgagccggtcgccgagggcgggtacgcggctgccctgctc
ctcgacgggtgggccatgctcggccggccggatctgcgggccggggaggaggcgctgcgg
aggtggatcggggcggccgcgctcgtccgggggcaggcggccggcgggaccgtggtcgtg
gtcgccgagccgacgttgcggcctgtgcaggcgctggtgcgctgggatcccgtcggacac
gcggtgcgcgaactcgccgagcgggccgagctggggtttccaccggtgtcgcggatggcc
gccgtgtcggggacggccgaggcggtcgcggggtttctgagcggggtcgaactaccctcg
gacgccgaggtgttggggccggtgccgttgccggtcacggaggccggacggcctcggcgc
gtgggcgggccgccgccgggggagcggtgggagcgagcgctcgtccgggtgccgccgggg
agcggggccgcgctggccggcgcgttgaagaccgcgcaggcggctcggatggcgcgtggg
ggcggggggaacgggagcgaggccccggtgcggattcggatcgatccgccggacatcggg
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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