KEGG   Serratia marcescens subsp. marcescens Db11: SMDB11_4531
Entry
SMDB11_4531       CDS       T03985                                 
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
smac  Serratia marcescens subsp. marcescens Db11
Pathway
smac00550  Peptidoglycan biosynthesis
smac01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:smac00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SMDB11_4531 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:smac01002]
    SMDB11_4531 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:smac01011]
    SMDB11_4531 (dacB)
Enzymes [BR:smac01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     SMDB11_4531 (dacB)
Peptidases and inhibitors [BR:smac01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   SMDB11_4531 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:smac01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   SMDB11_4531 (dacB)
SSDB
Motif
Pfam: Peptidase_S13 Beta-lactamase2 Transpeptidase
Other DBs
NCBI-ProteinID: CDG15092
Position
complement(4872284..4873717)
AA seq 477 aa
MRFSRIVSALACAFVLNANAAPVEEYTQYLPDGANLALVVQKIGAGAPTIDYHSQQMALP
ASTQKVLTALAALLQLGPDYRFTTTLESQGDIRDGVLRGNLIARFSGDPTFKRQSLRNMV
AVLKKQGVRQISGDVLVDTSVFASHDKAPGWPWNDLTQCFSAPPAAAIVDRNCFSVSLYS
APNPGDMAFIRVASYYPVNMFSQVRTLARGSADAQYCELDVVPGELNRFTLTGCLTQRSE
PLPLAFAIQDGASYAGAILKDELTQAGIQIDGHLKRQTRPGITGTVIAQTQSAPLHDLLK
IMLKKSDNMIADTVFRTIGHERFGVPGTWRAGSDAVRQVLRQKAGIDLGNTIIADGSGLS
RHNLLAPATMMQALQYIAQHDNELNFISMLPLSGYDGTLRYRGGLHEAGVDGKVSAKTGA
LQGVYNLAGFITTASGQRMAFVQYLSGYAVPPEDQKQRRAPLVRFESRLYRDIYQNN
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgcgtttttcacgaattgtcagtgcattggcttgcgcatttgttctgaatgcgaatgcg
gccccggttgaagagtacacacaatatctgcctgatggggccaaccttgccctggtcgtt
cagaaaatcggtgccggcgcgccgacgatcgattatcactctcagcagatggcgctgccg
gccagtacccaaaaagtgctgaccgcgctggcggccttgctgcaactcgggcccgattac
cgtttcaccaccacgctggagagccagggcgatatccgcgatggcgtgctgcgcggcaac
ctgatcgcccgcttcagcggcgatccgaccttcaagcgccagagcctgcgcaatatggtg
gccgtcctgaagaaacagggcgtgcgccaaatcagcggcgacgtgctggtcgatacctcg
gtcttcgccagccatgacaaggcgcccggctggccgtggaacgatctgacgcagtgcttc
agcgcgccgccggccgccgccatcgtcgatcgcaactgtttctcggtctcgctgtacagc
gcgccgaatccgggcgacatggcgtttatccgcgtcgcctcctattatccagtcaatatg
tttagccaggtgcgcaccctggcgcgcggctcagcagacgcgcagtactgcgagctggac
gtggtgccgggcgaactgaaccgctttaccctgaccggctgcctgacgcaacgcagcgaa
ccgctgccgctggccttcgccatccaggacggcgccagctatgcgggcgcaatcctgaaa
gacgaactgacccaggccggtatccagatcgacgggcacttgaaacgccagacgcgtccc
ggcatcaccggcacggtaatcgcgcaaactcagtcggcgccgctgcacgatctgttgaag
atcatgctgaagaaatcggacaacatgatcgccgataccgtcttccgcaccatcggccac
gagcgcttcggcgtaccgggcacctggcgagcgggctccgatgcagtgcggcaggtgctg
cgccagaaggccggcatcgatctgggcaataccattatcgccgacggttccggcctgtcg
cgccacaacctgctggcgccggcgactatgatgcaggcgctgcagtacatcgctcagcac
gacaacgagctgaacttcatctcgatgctgccgctgtccggctatgatggcaccctgcgc
taccgcggcggcctgcacgaagccggcgtcgacggcaaggtgtcggccaagaccggtgca
ctgcagggcgtctacaacctggcgggcttcatcacgaccgccagcggccagcgcatggcc
ttcgtgcagtatctctccggctacgccgtgccgccagaagatcagaaacagcgccgcgcg
ccgctggtgcgcttcgaaagccgcctgtatcgggacatttaccaaaacaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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