KEGG   Serratia sp. FGI94: D781_3416
Entry
D781_3416         CDS       T02433                                 
Name
(GenBank) DNA/RNA helicase, superfamily II
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
smaf  Serratia sp. FGI94
Brite
KEGG Orthology (KO) [BR:smaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smaf03009]
    D781_3416
Enzymes [BR:smaf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     D781_3416
Ribosome biogenesis [BR:smaf03009]
 Prokaryotic type
  rRNA helicases
   D781_3416
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_11 AAA_22 CMS1
Other DBs
NCBI-ProteinID: AGB83635
UniProt: L0MLK4
Position
3605292..3606620
AA seq 442 aa
MTATNFSELDLDERLINALRDKGYDRPTAIQAEAIPPAMDGRDVLGSAPTGTGKTAAFLL
PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELAAHTSLDIATITGGVAYMNHA
EVFSENQDLVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RNQTLLFSATLEGEAIREFAERILNEPVEVEADPSRRERKKILQWYYRADDVQHKTALLI
HLLQQPDVQKSVIFVRKRERVHELATWLREAGINTCYLEGEMVQAKRNEAVKRMMDGRVN
VLIATDVAARGLDILDITHVFNFDMPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKVGRYLNEPLKARVIDELRPKTRVPSEKSNGKPSKKVLAKRAADKNKAKSKEKAKVKVR
HREAKNVGKRRQPKGTPAADGE
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgacagcaaccaatttttccgaactcgatctcgatgaacgcctgatcaacgccctgcgt
gataaaggctacgaccgcccgaccgctattcaggccgaagccatcccaccggcgatggac
gggcgcgacgtcttgggttcggcgccgaccggtaccggtaagaccgccgccttcctgctg
cccgtgctgcagcatctgttggacttccctcgcaagaagtccggcccgccgcgcgtgtta
atcctgaccccgacgcgcgaactggcgatgcaggtcgccgatcaggcgcgtgagctggcg
gcccatacctcactggatatcgccaccattaccggcggcgtggcctatatgaaccacgcg
gaagtcttcagcgaaaaccaggatctggtggtcgccaccaccggccgcctgctgcagtat
attaaagaagagaacttcgactgccgcgcggtggaaacgctgatcctggatgaagccgac
cgcatgctggacatgggcttcgcccaggatattgaaaccatctccgccgaaacgcgctgg
cgcaaccagaccctgctgttctccgccacgctggaaggcgaagccatccgcgaattcgca
gagcgcattctgaacgagccggtggaagtcgaagccgacccttcccgccgcgagcgtaaa
aaaattctgcagtggtactaccgcgctgacgacgtgcagcataaaaccgccctgctgatc
catctgctgcagcagccggatgtgcagaagtcggtcattttcgtgcgcaagcgcgagcgc
gtgcatgagctggccacctggctgcgggaagcgggcatcaacacctgctatctggaaggc
gaaatggtgcaggccaagcgtaacgaagcggtgaaacgcatgatggacggccgcgtcaac
gtgctgatcgccaccgacgtcgccgcccgcggtctggacattctggacatcacccacgtg
ttcaactttgatatgccgcgcaccgccgatacctatctgcaccgtatcggccgcaccggc
cgcgccggccgtaaaggtaccgcaatttctctggttgaggcccacgaccacctgctgctg
ggcaaggtcggccgctatctgaatgaaccgctgaaggcgcgggtgattgacgagctgcgg
ccgaaaacccgcgtgccaagcgaaaagagcaacggcaagccgtccaagaaagtgctggcc
aagcgtgcggctgataagaacaaagccaaaagcaaagagaaagccaaggtgaaagttcgc
caccgcgaggcgaaaaacgtcggtaaacgccgccagccgaaaggcactccggcagccgac
ggcgaataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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