KEGG   Streptomyces malaysiensis: SMALA_1898
Entry
SMALA_1898        CDS       T05189                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
smal  Streptomyces malaysiensis
Pathway
smal03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SMALA_1898
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smal03400]
    SMALA_1898
DNA repair and recombination proteins [BR:smal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SMALA_1898
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SMALA_1898
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 AAA_21 RsgA_GTPase nSTAND1 AAA_33 AAA_22 APS_kinase HC2 DnaJ_CXXCXGXG NACHT Viral_helicase1 cobW ATPase
Other DBs
NCBI-ProteinID: ATL82132
UniProt: A0A291SMM1
Position
complement(2509703..2512729)
AA seq 1008 aa
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPIARQSPQAIVDRVLELPEGSRFQVLSPLVRERKGEFVDLFSDLQTKGYSRARV
DGTTVHLADPPKLKKQEKHTIEVVVDRLTVKESAKRRLTDSVETALGLSGGMVILDFVDL
DEDDPQRERMFSEHLYCPYDDLSFEELEPRTFSFNSPFGACPDCTGIGTRMEVDPELIIP
DEEKSLDEGAIHPWSHGHTKDYFGRLVGALADALGFRTDIPWAGLPQRAKKALLNGHRTQ
IEVRYRNRYGRQRAYTTAFEGAVPYVKRRHSEAESDTSRERFEGYMREVPCPTCEGTRLK
PIVLAVTVQDKSIADVSAMSISECAEFLRAMRLSPREKTIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DLGNTLIVVEHDEDTIKTSDWVVDIGPGAGEHGGKVVHSGPLSELLVNQESVTGHYLSGK
RAIPLPSTRRSVDPKRHLTVHGARENNLQDIDVSFPLGVLTAVTGVSGSGKSTLVNDILY
THLARELNGARAVPGRHTRVAGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETMEAKVRGYQPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSIAEVLDMPIEEALDFFEAVPTIARHLRTLNEVGLGYVRLGQPAPTLSGGEAQ
RVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLITVLSGLVDKGNTVIVIEHNLDVIK
TADWVVDMGPEGGSGGGLVIAEGTPEDVASVPASHTGKFLRDMLGDRVSDATVPAARKGG
ANNKKAPVKKAAAKSTAAKKTAATAAKKTVAKKAAAKSTAASKRASAK
NT seq 3027 nt   +upstreamnt  +downstreamnt
gtggccgaccgtctcatcgttcgtggcgctcgcgagcacaacctcaagaacgtctcactc
gaccttcctcgcgactcgctcatcgtcttcaccgggctgtccgggtcgggcaagtcgtcc
ctcgcgttcgacacgatcttcgccgaggggcagcgccgctacgtcgagtcgctctcctcc
tacgcccgccagttcctggggcagatggacaagcccgatgtggacttcatcgagggcctg
tcccccgcggtgtcgatcgaccagaagtcgacgtcgcgcaacccgcgctcgacggtcggc
accatcaccgaggtctatgactacctccggctgctgttcgcccgtatcggcaagccgcac
tgccccgaatgcggccgtccgatcgcccgccagtcgccgcaggcgatcgtggaccgggtg
ctggagctccccgagggcagccgcttccaggtgctctccccgctggtgcgcgagcgcaag
ggggagttcgtcgacctcttctccgatctccagaccaagggctacagccgcgcccgggtg
gacggcaccaccgtccacctggccgatccgccgaagctgaagaagcaggagaagcacacc
atcgaggtggtcgtggaccgcctcaccgtcaaggagagcgccaagcgccggctgaccgac
tcggtggagaccgcgctcggcctctccggcggcatggtgatcctcgacttcgtggacctc
gacgaggacgacccgcagcgagagcggatgttctccgagcatctgtactgcccgtacgac
gacctgtccttcgaggagctggagccgcgcaccttctccttcaactcgcccttcggcgcc
tgcccggactgcaccggtatcggcacccggatggaggtcgaccccgagctgatcatcccg
gacgaggagaagtcgctcgacgagggcgccatccacccctggtcccacggccacaccaag
gactacttcgggcggctggtcggcgcgctcgccgacgccctcggcttccgtacggacatc
ccctgggccgggcttccgcagcgcgccaagaaggccctgctcaacggccaccggacccag
atcgaggtccgctaccgcaatcgctacggccgccagcgggcgtacaccacggccttcgag
ggcgcggtgccctatgtgaagcggcgccattcggaggcggagagcgacaccagccgggag
cggttcgagggctatatgcgcgaggtgccctgccccacctgtgagggcacccgcctcaag
ccgatcgtcctggccgtcaccgtgcaggacaagtccatcgcggacgtctcggcgatgtcg
atcagcgaatgcgccgagttcctgcgcgccatgcggctcagcccgcgcgagaagaccatc
gccgagcgggtcctcaaggaggtcaacgagcggctgaggttcctggtcgacgtcggcctg
gactacctctcgctcaaccgggccgcgggcaccctctccggcggcgaggcccagcgcatc
cggctggccacccagatcggctccggtctggtcggtgtgctctacgtcctggacgagccg
tccatcggcctgcaccagcgcgacaaccaccggctgatcgagacgctggtgcggctgcgc
gacctcggcaacaccctgatcgtcgtggagcacgacgaggacaccatcaagacctcggac
tgggtggtggacatcggtccgggcgcgggtgagcacggcggcaaggtggtgcacagcggg
ccgctgagcgagctgctggtcaaccaggagtcggtgaccgggcactatctctccggcaag
agggccatcccgctgccgtcgacgcgccgctccgtggaccccaagcggcatctcaccgtc
cacggcgcgcgggagaacaacctccaggacatcgatgtgtccttcccgctgggggtgctc
accgccgtcaccggtgtctcgggctcgggtaagtccacgctggtcaacgacatcctctac
acccatctggcccgtgagctgaacggcgcgcgggcggtcccggggcggcacacccgggtc
gcgggcgacgatctcgtcgacaaggtggtgcatgtcgaccagtcgcccatcggccgcacc
ccgcgctccaacccggcgacgtacaccggcgtcttcgaccatgtgcgcaagctgttcgcg
gagacgatggaggccaaggtccgcgggtaccagcccggccggttctccttcaacgtcaag
ggcggccgctgtgagaactgctccggtgacggcaccatcaagatcgagatgaacttcctg
ccagatgtgtatgtgccgtgcgaggtctgccacggcgcgcgctacaaccgggagaccctg
gaggtgcactacaagggcaagtccatcgccgaggtgctggacatgcccatcgaagaggcg
ctggacttcttcgaggcggtgcccaccatcgcccgtcatctgcgcaccctcaacgaggtc
gggctgggctatgtccggctcgggcagcccgcgccgaccctctccggcggtgaggcccag
cgcgtcaagctggcgagcgagctccagaagcggtcgaccggccgcacggtgtatgtgctg
gacgagccgaccaccggtctgcacttcgaggacatcagcaagctgatcaccgtgctctcc
gggctggtcgacaagggcaacaccgtgatcgtcatcgagcacaacctcgatgtgatcaag
acggccgactgggtcgtggacatgggccccgagggcggcagcggcggtggtctggtgatc
gccgagggcaccccggaggatgtggcctcggtcccggccagccacaccgggaagttcctg
cgggacatgctgggcgaccgggtgagcgacgcgacggtgcccgccgcgcgcaagggcggc
gcgaacaataagaaggcgcccgtcaagaaggccgccgccaagagcacggcggccaagaag
accgcggcgaccgcggcgaagaagaccgtggccaagaaggcggcggccaagagcacggcc
gcctccaagagggcgtccgcgaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (26)   

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