KEGG   Serratia marcescens SM39: SM39_0170
Entry
SM39_0170         CDS       T03592                                 
Symbol
ffh
Name
(GenBank) signal recognition particle component with 4.5S RNA ffs
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
smar  Serratia marcescens SM39
Pathway
smar02024  Quorum sensing
smar03060  Protein export
smar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:smar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    SM39_0170 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SM39_0170 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SM39_0170 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:smar02044]
    SM39_0170 (ffh)
Enzymes [BR:smar01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     SM39_0170 (ffh)
Secretion system [BR:smar02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   SM39_0170 (ffh)
  Eukaryotic Sec-SRP protein
   SM39_0170 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_31 AAA_30 AAA_24 Helicase_RecD KTI12 YqeC AAA_33 APS_kinase AAA_14 AAA_19 ATP_bind_1 TsaE
Other DBs
NCBI-ProteinID: BAO32236
Position
193717..195078
AA seq 453 aa
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKESAV
GHEVNKSLTPGQEFVKIVKGELIAAMGEVNTELNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLKEKQKKKVLVVSADVYRPAAIKQLETLAEGVGIDFFPSDVKEKPIDIVNRALQQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFYPDRVASRILGMGDV
LSLIEDIESKVDREQAEKLANKLKKGDGFDLTDFLEQLKQMRNMGGMANMLSKLPGAGQL
PDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAMGAGMQVQDVNRLLKQF
DEMQRMMKKMKKGGMAKMMRGMKGMMPPGFPGR
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtttgaaaatttaaccgatcgattgtcgcgcacgttgcgcaatatcagcggccgcggg
cggctgaccgaagagaatatcaaggaaaccctgcgtgaagtgcgtatggcgttgctggaa
gcggacgtcgcgctgccggtggtgcgcgacttcatcaaccgcgtcaaagagagcgcggtc
ggccatgaagtcaacaagagcctgacgccggggcaggagttcgtcaagatcgtcaagggc
gagctgatcgccgcgatgggcgaagtcaacaccgagctgaatctggcggcccaaccgccg
gcggtggtgctgatggcgggcctgcagggcgccggtaaaaccaccagcgtcggtaagctc
ggcaaattcctgaaagaaaaacagaagaagaaagtgttggtggtttccgcggacgtttat
cgcccggcggcgatcaaacagctggaaacgctggcggaaggcgtcggcatcgacttcttc
ccgtccgacgtcaaagaaaaaccgatcgacatcgtcaatcgcgcgctgcaacaggccaag
ctgaaattctacgacgtactgatcgtcgataccgccggccgcttgcacgttgacgaagcg
atgatggacgagatcaagcaggtgcacgcggcgatcaagccggtggaaaccctgttcgtg
gtcgacgccatgaccggccaggacgccgccaataccgccaaggcgtttaacgaagcgctg
ccgctgaccggcgtggtgctgaccaaggtcgacggcgacgcgcgcggcggtgccgcgctg
tccatccgtcatatcaccggcaagccgatcaaattcctcggcgtgggcgagaagaccgaa
gcgctggagccgttctacccggatcgcgtggcatcgcgcatcctgggcatgggcgacgtg
ctgtcgctaatcgaagatatcgaaagcaaggtcgaccgcgagcaggcggagaagctggcc
aacaagctgaagaagggcgacggtttcgatctgaccgatttcctggagcagctcaagcag
atgcgcaacatgggcggcatggccaacatgctgagcaagctgccgggcgctggccagctg
ccggacaacgtcaagtcgcagatggacgataaagtgctggtgcgcatggaggcgatcatc
aactcgatgacgctgaaagagcgcgccaaaccggaaatcatcaagggctcgcgcaagcgc
cgcatcgcgatgggggccggcatgcaggtgcaggacgtcaaccgcttgctgaagcagttc
gacgaaatgcagcgtatgatgaagaagatgaagaaaggcggcatggcgaagatgatgcgc
ggcatgaaaggtatgatgccgccgggcttcccaggccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (30)   

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