KEGG   Serratia marcescens SM39: SM39_2474
Entry
SM39_2474         CDS       T03592                                 
Name
(GenBank) type VI secretion system-associated protein, IcmF-like
  KO
K11891  type VI secretion system protein ImpL
Organism
smar  Serratia marcescens SM39
Pathway
smar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:smar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SM39_2474
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:smar02044]
    SM39_2474
Secretion system [BR:smar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SM39_2474
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF6384 ABC_trans_CmpB
Other DBs
NCBI-ProteinID: BAO34476
Position
2526967..2530602
AA seq 1211 aa
MLSTLFSIITSRLLWGFVGITALAFIIWMIGPLVAIGDYRPLEPELNRQIAIGVIYLIWF
LCRLIPRLYSAWFNSRLLSNLRAAEAVPAEDGKPEVKQDDQLAQRFDEAAQLLKKARFTP
GQGDGKHRWMTRFSRQYLYQLPWYVIIGAPGAGKTTALVNSGLQFPLADRFGKSALRGVG
GTRNCDWWFTNDAVLLDTAGRYTTQESQREEDAGEWQSFVALLKKYRTRQPINGVMVTIS
VADLLSDSAEARAAQASALRKRLIELHEQLGIHFPVYVLVTKTDLLNGFMAYFGSFDKAQ
RDQIWGFTFPYERSRQPDFNLNAAFEQQYALLQQRLDAALPDTLLMEHDARQRAESYLFP
QEFAALRPLLSQYLEQVFATSSFETRFTPRGIYFTSGTQEGLPFDRVMGELNRYLQLPTA
NSGAQANAAWDSVGQEAPIPAAKGQSFFLKETLESVVFQESGLAGSNRWWEYRNRALHWA
GYIALAVILAVLAMLWFTSYGNNKAYLAEVAAKVPGVERQGQNLTQLGNGDMFSLLPFLN
SLLHLPDSQNFSLDDPPFTYRMGLFRGDQVSDAGNALYQKALKELLLPQVAQQIATTLRN
DNHGDADFSYEALKAYQMLYLPKQYDGKFLRAWVMLNLQRNLPQGSTQKQLQQIEWHLGQ
LLDTQIQASPYAKDDPLVAQAQAAINRAPLSQRVYGRLKRLLLKQTDIKPVSLVDLAGPQ
TELAFSRKSGKPVTDGVPGLFTSQGYWKAFNDNIDPVTDTLRKEDVWVLNSQTPEQKSAD
LTKTIRQLYMQDFISAWDELLGDIQLANIGNLTQRISSARLLSGNPSPMRNLLVNVSKNV
TLRDEKSDADSRSLLAKTEDRLNQNANRTLEALFTNRPANADGDVSAQPEQLVMAHFAPL
LELAQSQGEGNKAIPFDSVLKQVDELYSYLTAVQGAANSGMSAPPSDIIPRLQAESGRLP
APFKQMLLSLAIGASSDTQRKEMENVKKRISFEVGSFCRQAIAGRYPLVARARQEVTPDD
LARMFAPNSGLMDSFFRDNLQGKVDTTRANWRFTPGVDGKTLPGGEGILRSFQQAQRIRD
AFFANGTATPSYRVTVRPVRMDNDILNLTLDIDGQLFKYSHGPQVPLVVSWPGTRNTNQV
HLQLALANGTTASLVTSGPWALNRLVDMAQSSGTGGLGRQATFNLDGHRVTLEFTPNSIR
NPFQLPAFSCP
NT seq 3636 nt   +upstreamnt  +downstreamnt
atgctcagtacgttattctccatcatcaccagccgcctgctgtggggctttgtcggcatt
accgcgctggcgttcatcatctggatgatcggcccgctggtggccatcggcgactatcgc
ccgctggagccggaactcaaccgccagatcgccatcggcgttatctacctgatctggttc
ctgtgccgcctgatcccgcgcctctacagcgcctggttcaacagccgcctgctgagcaac
ctgcgcgccgccgaagcggtgccggcggaagacggcaagcccgaggtcaaacaagacgat
cagttggcgcagcgcttcgacgaagcggcgcagctgctgaaaaaggcgcgcttcacaccg
ggccagggcgacggcaaacaccgctggatgacccgtttcagccgccagtacctgtaccag
ctgccgtggtatgtgatcatcggcgcgcccggcgccggcaagaccaccgcgctggtcaac
tccggcctgcaattcccgctggcggatcgcttcggcaaatccgcgctgcgcggcgtgggc
ggcacccgcaactgcgactggtggtttaccaacgacgccgtgctgctcgacaccgccggc
cgctacaccacgcaggaaagccagcgcgaagaagacgccggcgagtggcaaagcttcgtc
gcgctgctgaaaaaataccgcacccgtcagccgatcaacggcgtgatggtgaccatcagc
gtcgccgatctgctgagcgacagcgccgaagcgcgcgccgcccaggccagcgcgctgcgc
aaacgcctgatcgaactgcacgaacagctgggcattcacttcccggtctatgtgctggtc
accaaaaccgacctgctcaacggctttatggcctacttcggcagcttcgacaaagcacag
cgcgatcagatctgggggttcaccttcccttacgagcgctcgcggcagccggacttcaac
ctgaacgccgctttcgaacagcaatacgccctgctgcaacagcggctggacgcggcgttg
ccggatacgctgctgatggagcacgacgcgcgccagcgcgccgaaagctacctattcccg
caggagttcgccgctctgcgcccgctgctgagccaatacctggaacaggtgttcgccacc
tccagttttgaaacccgctttaccccgcgcggcatctatttcaccagcggcacgcaggaa
ggcctgccgttcgaccgggtgatgggcgagctgaaccgctatctgcagctgccgacggca
aactcaggggcgcaggccaacgcggcctgggacagcgtgggccaggaagcgccaatcccg
gcggccaagggccaaagcttcttcctgaaagagacgctggaatcggtggtcttccaggaa
tccgggctggcgggcagcaaccgctggtgggaataccgcaaccgcgccctgcactgggcg
ggttacatcgcgctggcggtgatcctggcggtgctggcgatgctctggttcaccagctac
ggcaacaacaaggcctatctggcggaagtggccgccaaggtgcccggcgtcgagcgccag
gggcaaaacctgacgcagttgggcaacggcgacatgttctcgctgctgccgttcctcaac
agcctgctgcacctgccggacagccaaaacttttcgctggacgatccgccgttcacctac
cgcatggggctgttccgcggcgatcaggtgagcgacgccggcaatgcgctgtaccaaaaa
gcgctgaaagagctgctgctgccgcaggtggcgcaacagatcgccaccacgctgcgcaac
gacaaccacggcgatgcggacttcagctacgaagcactgaaggcctaccagatgctgtat
ctgccgaagcagtacgacggcaaattcctgcgcgcctgggtgatgctcaacctgcagcgc
aacctgccgcagggcagcacccagaaacagctgcagcagatcgaatggcatttgggccag
ctgctggatacgcagatccaggcctcgccttacgccaaagacgacccgctggtggcgcag
gcgcaggctgccatcaaccgggcgccgctgtcgcagcgcgtctacggccgcctcaagcgc
ctgctgctgaagcagaccgacatcaagccggtcagcctggtcgatttggccggcccgcag
accgagctggcgttcagccgcaaaagcggcaaaccggtgaccgacggcgtgccgggcctg
tttacctcgcaggggtattggaaagcgttcaacgacaacatcgatccggtgaccgacacc
ctgcgcaaggaagacgtctgggtgttgaacagccagacgccggagcagaagagcgccgac
ctgaccaagaccatccgccagctgtacatgcaggacttcatcagcgcctgggatgagctg
ctgggggatatccagctggccaacatcggcaacctgacccagcgcatcagcagcgcgcgc
ctgttgtccggcaacccgtcgccgatgcgtaacctgctggtcaacgtcagcaaaaacgtc
accctgcgcgacgagaaaagcgacgccgactcccgttcgctgctggccaaaaccgaagac
agactgaatcaaaacgccaaccgcacgctggaagcgctgttcaccaaccggccggccaac
gccgacggcgacgtatccgcccagccggaacagctggtgatggcgcacttcgcgccgctg
ctggagctggcgcaaagccagggcgaaggcaataaggcgatccctttcgacagcgtgctc
aagcaggtcgatgagctgtacagctatctgacggcggttcagggcgcggccaacagcggc
atgtcggcgccaccgagcgacatcatcccgcgtctgcaggccgaatccggccgcttgccg
gcgccgttcaaacagatgctgctttcgctggcgatcggcgccagcagcgacacccagcgc
aaagagatggagaacgtgaaaaagcgcatcagcttcgaggtcggcagtttctgccgccag
gcgatcgccggccgttatccgctggtggcccgggcgcgccaggaagtgacgccggacgat
ctggcgcgcatgttcgcgccgaacagcgggctgatggacagcttcttccgcgacaacctg
cagggcaaggtcgacaccacccgcgccaactggcgtttcacgcccggcgtggacggcaag
acgctgcccggcggcgagggcatcctgcggtcgttccagcaggcgcagcgcatccgcgac
gcctttttcgccaacggcaccgcgacgccctcttatcgcgtgaccgtgcggccggtgcgg
atggataacgacattctcaacctgacgctggatatcgacgggcagctgttcaaatacagc
cacggcccgcaggtgccgctggtggtcagctggccgggcacccgcaataccaaccaggtg
catctgcagctggcgctggccaacggcaccaccgccagcctggtgaccagcgggccgtgg
gcgctgaaccgcctggtggatatggcgcagtcttcgggcaccggcggcctcggccgccag
gcgaccttcaatctcgacggccaccgcgtcacgctggagttcacgcccaacagcattcgc
aatccgttccaactgccggccttctcgtgcccgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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