KEGG   Serratia marcescens SM39: SM39_3325
Entry
SM39_3325         CDS       T03592                                 
Symbol
nrdE
Name
(GenBank) ribonucleoside-diphosphate reductase 2, alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
smar  Serratia marcescens SM39
Pathway
smar00230  Purine metabolism
smar00240  Pyrimidine metabolism
smar01100  Metabolic pathways
smar01232  Nucleotide metabolism
Module
smar_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
smar_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:smar00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SM39_3325 (nrdE)
   00240 Pyrimidine metabolism
    SM39_3325 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smar03400]
    SM39_3325 (nrdE)
Enzymes [BR:smar01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SM39_3325 (nrdE)
DNA repair and recombination proteins [BR:smar03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SM39_3325 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: BAO35289
Position
3412996..3415140
AA seq 714 aa
MATTELTRPETGALDYHSLNAMLNLYDAEGRIQFDKDRLAARHYFLQHVNQNTVFFHNLE
EKLRYLVEEGYYEPQVLAQYEFPFIKQLFQQAYAKKFRFETFLGAFKYYTSYTLKTFDGK
RYLERYEDRVCMVALTLAAGDTALAQDLVEEMISGRFQPATPTFLNCGKRQRGELVSCFL
LRIEDNMESIGRAVNSALQLSKRGGGVAFMLSNIREVGAPIKRIENQSSGVIPIMKMLED
AFSYANQLGARQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFELA
KNNEEMYLFSPYDVERVYGVPFSEIAVSEKYREMVDDKRIRKSRINAREFFQVLAEIQFE
SGYPYVMFEDTVNRENPIAGRINMSNLCSEILQVNRASTYHEDLSYDRIGKDISCNLGSL
NIAKTMDAPDFGKAIETAIRALTAVADMSDIRSVPSIAEGNRSARAIGLGQMNLHGYLAR
ERIFYGSEEGIDFTNLYFYTVAYHAIRASNRLAIERGGAFDGFEHSRYASGEYFDKYTER
DWLPQTERVRELFAAAGIAIPNRDDWRALRQSVMLHGLYNQNLQAVPPTGSISYINNATS
SIHPIVSRIEIRKEGKIGRVYYPAPYMTNDNLAYYQDAYEIGPEKIIDTYAAATQHVDQG
LSLTLFFRDTATTRDINRAQIYAWRKGIKTIYYIRLRQMALEGTEVQGCVSCAL
NT seq 2145 nt   +upstreamnt  +downstreamnt
ttggcaacgacagaactgaccaggcccgaaacgggcgcgctggattaccattcgctcaac
gcgatgctcaatctttacgatgcggaaggccggatccagttcgataaagatcggctggcg
gcgcggcactacttcctgcagcacgtcaaccaaaacaccgtgtttttccacaacctggag
gaaaagctgcgctatctggtggaggaaggctactacgagccgcaggtgctggcgcagtac
gaattcccgtttatcaagcagctgtttcagcaggcctacgccaaaaaattccgcttcgag
accttcctcggcgccttcaagtactacaccagctatacgctcaaaaccttcgacggcaag
cgctatctggaacgctacgaagaccgggtgtgcatggtggcgctgacgctggcggcgggc
gacaccgccctggcgcaggatctggtggaggagatgatttcgggccgcttccagccggcc
acgccgactttcctcaactgcggcaaacgccagcgcggtgagctggtctcctgcttcctg
ctgcgcatcgaagacaatatggaatcgatcggccgggcggtgaactccgcgctgcagctg
tcgaaacgcggcggcggcgtggccttcatgctgagcaatattcgcgaggtgggcgcgccg
atcaagcgcatcgagaatcagtcctccggcgtcattccgatcatgaaaatgctcgaagac
gccttctcctacgccaaccagctcggcgcgcgccagggggccggcgcggtgtatctcaac
gcccaccacccggacattctgcgttttctcgacaccaagcgcgaaaacgccgacgagaag
atccgcatcaaaacgctgtcgctgggggtggtgatcccggatatcaccttcgagctggcg
aagaacaacgaagagatgtacctgttttcgccctacgacgtcgaacgggtgtatggcgtg
ccgttttcggagattgccgtcagcgagaagtaccgcgagatggtggacgacaagcgcatc
cgcaagtcgcgcatcaacgcgcgcgagttcttccaggtgctggcggagatccagttcgaa
tccggctacccctatgtgatgttcgaggacacggttaaccgggagaacccgatcgccggg
cggatcaacatgagcaacctgtgttcggagatcctgcaggtcaaccgcgccagcacgtat
cacgaggatctgagctacgatcgcatcggcaaggacatctcctgcaacctcggctcgctg
aacatcgccaaaaccatggacgcgccggacttcggcaaggcgatcgagaccgcgatccgc
gcgctgaccgcggtggccgacatgagcgatatccgctcggtgccgtcgatcgccgaaggc
aaccgcagcgcccgcgccatcggtttgggccagatgaacctgcacggttacctggcgcgc
gagcgcatcttctacggctcggaagaaggcatcgacttcaccaacctctatttctatacc
gtggcctatcacgccatccgcgcctctaaccggctggcgatcgagcgcggcggcgccttc
gacggctttgagcattcccgctatgccagcggcgagtacttcgataagtacaccgagcgc
gactggctgccgcagaccgagcgggtgcgcgagctgttcgccgccgccggcatcgccatt
ccgaaccgcgacgactggcgcgcgctgcgccagtcggtgatgctgcacgggctgtacaac
cagaacctgcaggcggtgccgccgaccggttccatctcgtacatcaataacgccacctcc
agcatccacccgatcgtttcacgcatcgagatccgcaaggaaggcaagatcggccgcgtt
tactacccggcgccctacatgaccaacgacaacctggcgtattaccaggatgcctatgag
attggcccggaaaagatcatcgatacctacgccgccgccacgcaacacgtcgatcagggg
ctgtcgctgacgctgttcttccgcgataccgccaccacccgcgatatcaaccgcgcgcag
atctacgcctggcgcaaaggcatcaagaccatttactacatccgcctgcgccaaatggcg
ctggaaggcaccgaggtgcagggctgcgtgtcctgcgcgctgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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