KEGG   Serratia marcescens SM39: SM39_4319
Entry
SM39_4319         CDS       T03592                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
smar  Serratia marcescens SM39
Pathway
smar00300  Lysine biosynthesis
smar00470  D-Amino acid metabolism
smar01100  Metabolic pathways
smar01110  Biosynthesis of secondary metabolites
smar01120  Microbial metabolism in diverse environments
smar01230  Biosynthesis of amino acids
Module
smar_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:smar00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SM39_4319 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SM39_4319 (dapF)
Enzymes [BR:smar01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     SM39_4319 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: BAO36249
Position
complement(4492187..4493011)
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE
PNFDPQAVPFRAAKAEKTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVKTAKVELLGPVLE
GHERFPERANIGFMQVVSRDHIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV
ELPGGSLHIRWKGPGNPLFMTGPATHVYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctccaaaatgcacggtctgggcaacgactttatggtggtcgatgccgttaca
cagaatgtctatttttcacctgagctgatccgccggctggccgatcggcacctgggcgtc
ggctttgaccagatgctggtggtagaaccgccttacgatcccgagctggattttcactac
cgaattttcaacgccgacggcagcgaagtggcgcagtgcggcaacggcgcgcgctgcttc
gcgcgctttgtgcggctgaaagggctgaccaacaaacgcgacatccgcgtcagcacccaa
accgggcgcatggtgctcagcgtcaccgacgacgatctggtgtgcgtcaacatgggcgag
cctaatttcgatccgcaggcggtgccgttccgcgccgccaaggcggaaaagacctacatc
atgcgcgcggcggaacacaccgtgctgtgcggcgtggtgtcgatgggcaacccgcattgt
gttttgcaggtggacgatgtaaaaaccgccaaggtggagttgctcgggccggtgctggaa
gggcatgagcgcttcccggaacgggccaacatcggttttatgcaggtggtcagccgcgat
catatcaagctgcgcgtttacgagcgcggcgccggcgaaacgcaggcctgcggcagcggc
gcctgtgcggcggtggcggtggggatccaacaggaattgctgtcagaagaggtgcatgta
gaactgccgggcggcagcctgcatattcgctggaaagggccgggcaacccgctgtttatg
accggcccggcaacccatgtctatgacggatttattcatctatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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