KEGG   Serratia marcescens SM39: SM39_pSMC1_20
Entry
SM39_pSMC1_20     CDS       T03592                                 
Name
(GenBank) putative conjugal transfer protein, TrbL-like
  KO
K07344  type IV secretion system protein TrbL
Organism
smar  Serratia marcescens SM39
Pathway
smar02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:smar00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SM39_pSMC1_20
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:smar02044]
    SM39_pSMC1_20
Secretion system [BR:smar02044]
 Type IV secretion system
  Trb secretion system protein
   SM39_pSMC1_20
SSDB
Motif
Pfam: TrbL
Other DBs
NCBI-ProteinID: BAO36937
Position
pSMC1:15562..17223
AA seq 553 aa
MKALHKAALIGVTLALYSTAASAQLTNQGMLDQVVTEFATRATSWQTVVMNAAMFLFWTL
GTISLVFTFGFMALRKADIGEFFAEFIRFILFFGFFLWLLRNGPAFANSIIQSLARIGEQ
ASGVASVTPSGIVDIGFMILKQAFSNSSIWSPVDSFIGVALSLGILILLAVVAINMLLLL
VSGWLLMYAGIFFLGFGGSRWTSDMAINYYKTVLGVAVQIMTMVLLVGIGNDLLSSFYAR
MNTGTLNFEELGVMLVFCVALLMLVNRVPPLVAGVISGTGVGNAGGIGNFGAGAAIGAAM
GAASMAAGAASVAGAAVMGGATSAAGGMSAIKAAFEKAGSSAGGESGGMPMLGGGSDSGS
DAGSFAQAAGFGGGSSSGAGTTTPLAQAAGFGSSSGSGASGSGGGNGQQSGKSGGGSSSK
GSDEAGSKKAQQGGQQAAPGSTGPGLLASAASALGTAGRVTADAGANLMQGVGEVAKAKA
ASIRDAAAERIADTTGGKIAAAIRASAESDQASAAEAVPTFGGNNLAGADSAAADPDDEV
AAFANREHGKSEA
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgaaagcactgcacaaggcggcgctgatcggcgtcaccctcgcgctttactccaccgcc
gcatcggcccagctcaccaaccaagggatgcttgaccaggtggtgacggagttcgccacg
cgggccacgtcctggcagacggtggtgatgaatgccgcgatgttcctgttctggacgctg
ggcacgatctcgctggttttcacgttcggcttcatggcgctgcgcaaggccgacattggc
gagttcttcgccgagttcatccgcttcatcctgttctttggcttcttcctctggctgctg
cgcaacggcccggccttcgccaactcgatcatccagtcattggcccggatcggtgagcag
gcgtccggggtggcatcggtgacaccctcgggcatcgtggatatcggattcatgatcttg
aagcaggcatttagcaactcgtcgatctggtcgcccgtggatagcttcatcggcgtggcc
ttgagcctcggcatcctgatcttgctggctgtcgttgccataaacatgctgttgctgctc
gtctcgggctggctgctgatgtacgccggcatcttcttcctcggcttcggcggaagccgt
tggacgtccgacatggcgatcaactactacaagaccgtgctgggcgtggccgtgcagatc
atgacgatggtgctcctggtcggcatcgggaacgacctgctttccagcttctacgccagg
atgaacaccggcacgctgaactttgaagagctgggcgtgatgctggttttctgcgtggcg
ttgctcatgctggtcaatcgcgtgccgccgctggtcgcgggcgtcatttccggtacgggc
gtggggaacgctggcggcatcggtaatttcggcgcgggcgctgccatcggtgcggctatg
ggcgcggcgagcatggccgctggtgcggcaagcgtggccggtgcggccgtgatgggtggt
gcaacctcggccgccggcggcatgtcggccatcaaggcagcgttcgagaaagcagggtct
agcgccggcggtgaatcgggcggaatgcccatgctcggcggtggctccgactccggcagc
gatgcaggctcgtttgcgcaagctgctggctttggtggcgggtcaagctcaggtgcgggc
accactacaccacttgcacaggccgccggtttcggcagcagctcgggcagcggtgccagc
ggctcgggcggcggcaatgggcagcagtccggtaaatcgggtggaggttccagctcgaag
ggtagcgacgaagccggcagcaagaaagcccagcaaggcggccagcaggccgcaccaggc
agcaccggccccggcttgctggcctcggccgcatcggcgcttggcacggcgggccgcgtg
acggccgacgccggcgcaaatctgatgcaaggcgtcggagaggttgcgaaggccaaggcc
gccagcatccgcgacgccgccgccgagcgcatcgccgacaccaccggcgggaagatcgcg
gcggcgatcagggcaagcgcggagagcgaccaggccagcgctgccgaggcggtgccgaca
ttcggcggcaacaacctggcaggggccgattcggccgctgccgatcctgatgatgaagtg
gccgcgttcgccaaccgcgagcacggtaaatcggaggcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system