KEGG   Sphingopyxis macrogoltabida 203: LH19_25205
Entry
LH19_25205        CDS       T04627                                 
Name
(GenBank) F-box protein 20
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
smaz  Sphingopyxis macrogoltabida 203
Brite
KEGG Orthology (KO) [BR:smaz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smaz03016]
    LH19_25205
Enzymes [BR:smaz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     LH19_25205
Transfer RNA biogenesis [BR:smaz03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    LH19_25205
SSDB
Motif
Pfam: 2_5_RNA_ligase2 LigT_PEase
Other DBs
NCBI-ProteinID: ALJ16188
UniProt: A0A0P0DI77
Position
complement(5103888..5104415)
AA seq 175 aa
MRARNPLYVMAKPPPEVQAAIAALPRNDPGRGPDLLHVTLISLYDLHYAPPGWLPATIAA
LDGFAAAPFALRFDRFENRKAVTLRTRDPLAGARAFQKALVDHLLREKAPIMDGTTPEPH
ITINYRGDRLGSQTFGALKLPPIEWTVREILLMESVVGKTTHVEHGRWALTLPSH
NT seq 528 nt   +upstreamnt  +downstreamnt
atgcgcgcccggaaccccctctatgtcatggccaagccgccgccggaggtgcaggcggcg
atcgccgcgctgccacgcaacgaccccgggcgcgggcccgacctgctccatgtcacgctc
atctcgctctatgacctccattatgcgccgcccgggtggctgcccgcgaccatcgccgcg
ctggacggcttcgccgcggcgcctttcgcgctccgcttcgaccggttcgagaaccgcaag
gcggtgactttgcgcacgcgcgatccgctggccggggcgcgggcgttccagaaggcgctg
gtcgaccatctgctacgcgaaaaggcgccgatcatggacggcaccacccccgaaccgcac
atcacgatcaactatcgcggcgaccggctgggttcgcagaccttcggcgcgctgaaactg
cccccgatcgaatggacggtgagggaaatattgttgatggaaagcgttgtcggcaagacg
acgcatgtcgagcacggccgctgggcgctgacgctgccgagccactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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