KEGG   Sinorhizobium medicae: Smed_2284
Entry
Smed_2284         CDS       T00555                                 
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
smd  Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:smd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smd03021]
    Smed_2284
Transcription machinery [BR:smd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Smed_2284
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 HTH_28 HTH_23 HTH_24 vWA-TerF-like DUF134
Other DBs
NCBI-ProteinID: ABR61116
UniProt: A6UBT6
Position
2361258..2361827
AA seq 189 aa
MRPDREWTRDPARLTGRAMRPAAEMKDFRRDLVSLLPKLRRFAMTLTRNASDADDLVQEA
CERAIARSHLWNGDGRLESWVYAMTRNLWVDEIRKRKVRSGSAAAVFELDQLNVEATAEK
AVYVNQVQKMILSMPEGLASVFLLVNVEGHSYRETAEILGIPVGTVMSRLSTARLRLAAM
LSESTERRA
NT seq 570 nt   +upstreamnt  +downstreamnt
atgcgtccggatcgcgaatggacgcgcgatccggcacgtctcactggaagagcaatgcgc
ccagcggcagaaatgaaggacttcagacgggatttggtcagcctgctgcccaaattgcgt
cgcttcgccatgacgctgacccgcaacgccagtgacgccgacgacctcgtccaggaggct
tgcgaacgcgccattgcacgcagccatctctggaatggcgacggtcgcctggaaagctgg
gtctatgcgatgacgcgcaacctgtgggtggatgaaatccgcaagcgcaaggtgcgcagc
ggcagtgcggccgctgttttcgaactggaccaactgaacgtcgaagcgacagccgagaag
gctgtctatgtcaatcaggtgcagaagatgatcctctctatgcctgagggattggcgagc
gttttcctcctcgtcaatgtcgaaggccatagttaccgggaaacggcagagatcctcggc
attccggtcggcaccgtcatgagcagattgtcgacggcgcggctgaggcttgcagccatg
ttatccgagagtaccgaaaggagggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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