KEGG   Sinorhizobium medicae: Smed_3187
Entry
Smed_3187         CDS       T00555                                 
Name
(GenBank) NAD-glutamate dehydrogenase
  KO
K15371  glutamate dehydrogenase [EC:1.4.1.2]
Organism
smd  Sinorhizobium medicae
Pathway
smd00220  Arginine biosynthesis
smd00250  Alanine, aspartate and glutamate metabolism
smd00430  Taurine and hypotaurine metabolism
smd00910  Nitrogen metabolism
smd01100  Metabolic pathways
smd01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:smd00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    Smed_3187
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Smed_3187
   00220 Arginine biosynthesis
    Smed_3187
  09106 Metabolism of other amino acids
   00430 Taurine and hypotaurine metabolism
    Smed_3187
Enzymes [BR:smd01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.1  With NAD+ or NADP+ as acceptor
    1.4.1.2  glutamate dehydrogenase
     Smed_3187
SSDB
Motif
Pfam: Bac_GDH_CD GDH_C GDH_HM3 GDH_ACT2 GDH_ACT3 GDH_HM1 GDH_ACT1 ELFV_dehydrog
Other DBs
NCBI-ProteinID: ABR62011
UniProt: A6UED1
Position
3352309..3357096
AA seq 1595 aa
MGVKYNPKRDRHIDAARAAGSRFGAETLAPEILFGGASNDDLDQYTPEMLALTAAHARSE
LARWDGGKPRVSVETVPGIAPGGTEASIIAITERNMPFLYDSVMGEVTSTHRDIHLAIHP
ILVMEAGQAVKLFDPDEGSRPEHRVSHIQIHLSKLTPLEERSLSKRISDVLEQVHQAVHD
WPAMTALLDQAMRELEDYNASRKKSDRDEALAFLRWLRDSNFTFLGMREYTYSGKGGEAT
VERGKGRGLGILSNPDVRVLRQGKDAVLTTPEILAFLEGPDFLIVTKANVKSVVHRRAHM
DYIGVKRFDASGNVIGELRIVGLFTSTAYTRQASEIPLLRHKIEKIIDHFGYDPQSHSGK
TLANTLESYPRDDLFQIDIGLLAAFCEQINELGDRPRVRVLPRIDHFDRFVSVIVFVPRE
QYDSDVREKLGEYLKTVYDGRVSAYYPAFPEGGLARVHFIIGRSGGKTPRVPQAKLEEAV
RAIVTRWIDRFNLLARKEGTEISVGEAYQAAFTPAEAYADLADISACRADDPIRISFYHR
HQERPDTLELKIFHADTPVSLSRRVPLLENLGFRVISEQTYDIGVRTHGDEPREVVLHDM
ELIHRDGHTLNLAKMGPNLEEAFLAAWDGATEDDNFNRLVMLAGLTAREVTVLRAYARYL
RQAGITYSQGYIADTLNKYPTIAADIFRLFSTRMDPTTEVKTRTKKCNALLAGIEEALSA
VPSLDEDRILRRYVNAVQSTLRTNYFQKDADGRPRAVLAFKLDPKQLDGLPEPRPFREIF
VYGTEVEGVHLRFGKVARGGLRWSDRAQDYRTEVLGLVKAQQVKNAVIVPVGAKGGFYPK
QLPAGGSRDEIFKAGTEAYKTYIRTLLSVTDNIVGQEVVPPADTLRLDGDDPYFVVAADK
GTATFSDTANALAQEADFWLDDAFASGGSAGYDHKKMGITARGAWEAVKRHFREMDVDIQ
TTPFTVAGVGDMSGDVFGNGMLLSEKIRLIAAFDHRDIFIDPNPDIDLSFAERKRIFALP
RSSWQDYDRKALSPGAMIISRSEKLVTLTPEAMAAIGIDKPKATPFEIMSTILKSPVDLL
WFGGIGTYVRGSGETDAEVGDRANDAIRITAEEVRARVIGEGANLGVTQKGRIGFSLNGG
RCNSDAIDNSAGVNSSDVEVNIKIALASAMRDGRLTRPKRNTLLASMTDEVGHLVLRNNY
QQSLAISLTEMQGLANRTPLARLMARLGADGHLNRKVETLPTDQAMSERYQAGRPLTRPE
IGVLLSYAKLVLFDELTISDLPDDPYFTATLERYFPAKMRKTYAGDIHGHRLRREIIATV
LVNETINRGGPAFASTLTDATGFLSADVVKAAVLALDGFDLPRIYAEIDALDNRIGGMIQ
NRLYQEVGRIFALVAARVLRTRASEGSVAEAVARLRDGLQKLRGTMRAAISREGAEEARQ
KAAGFIENGVPAKLAEEIAELSLMTLVPEIMQIAIVTGEPLNRTAQAYFTVTESLRVNRL
LAAADRVPATEQFEAMALSRAVGDIGTARRDITIAALVEYKGERNPVLAWQDRDRQRVAS
VGDQLRLLTEKGETTLAKVTVAAGVLSDLARGWTK
NT seq 4788 nt   +upstreamnt  +downstreamnt
atgggcgtgaagtataatccgaagcgggatcggcacatcgatgcggcccgggcggcagga
tccagatttggggccgagaccctggcacctgaaatcctcttcggcggcgcgagcaacgac
gatctggaccagtacacgcccgaaatgctggcactcaccgcggcccatgcacgcagcgag
ctcgcccgctgggacggcggcaagccgcgggtgtcggtggagacggtacccggcattgcc
cctggcggcaccgaggcctcgatcatcgcgatcaccgagcgcaacatgcccttcctttac
gactcggtgatgggagaagtgacgagcacacaccgcgacatccatctggcgatccacccg
atcctggtgatggaagccggccaggcggtgaagctgtttgatcccgacgaggggagtaga
cccgagcaccgcgtcagccacatccagatccatttgagcaagctgactccgctcgaggag
cgatcgctcagcaagcggatttcggacgtcttggagcaggtccaccaggcggtgcacgat
tggccggcgatgaccgctctgctcgaccaggcaatgcgggagctggaggattacaacgcg
tcccgcaagaagagcgaccgcgacgaggcactggctttccttcgctggctaagggacagc
aactttaccttcctcggcatgcgggaatatacctattccggcaagggcggagaggcgacg
gtcgaacgcggcaagggcaggggcctcggcatcctgtccaatccggacgtgcgggtcctc
cgccagggcaaggacgcggtgctgacgacgccggagatcctcgcttttctcgagggtccc
gacttcctgatcgtcaccaaggccaatgtgaagtcggtcgtgcaccgccgtgctcacatg
gattacattggcgtcaaacgcttcgacgcttccggtaacgtcatcggagagttgcgtatc
gtcggactgttcacctcgacggcttacacccggcaggcatcggaaattccgctgctcaga
cacaagatcgaaaagatcatcgatcacttcggctacgatccgcagagccactccggcaag
acgctcgcgaatacgctggagtcctatccacgcgacgatctcttccagatcgacatcggc
ctgcttgccgccttctgcgaacagatcaacgagctcggcgatcggccgcgggtgcgggtg
ctgccgcgcatagatcatttcgaccgcttcgtttccgtcatcgtcttcgtgccgcgcgaa
caatatgactccgatgtccgggagaagctcggcgaatatctgaaaactgtctatgacggc
cgcgtctcggcctattaccccgctttccccgaaggcgggcttgcgcgagtacacttcatc
atcggccgctcgggcggcaagacgccacgggttccgcaggcgaagctcgaagaggcggtc
cgcgccatcgtcacccgctggatcgatcggttcaacctgctcgcgcgcaaggaaggaacg
gaaatttccgtcggggaggcctaccaggcagccttcacacccgcagaagcctatgccgat
ctcgcagacatctcggcctgccgggccgacgacccgatccgcatctccttctaccatcgg
caccaggagaggcccgacacgctggaactgaagatcttccatgccgacacgcccgtttcg
ctgtcgcgccgtgtgccgcttctcgaaaatctcggctttcgcgtgatcagcgagcagacc
tacgacatcggcgtgcgcactcatggggacgagccccgcgaggtcgtgctccacgacatg
gaactgatccaccgcgacgggcacacactcaacctcgccaagatgggtccgaacctggag
gaggccttcctcgctgcctgggacggcgcgacggaggacgacaatttcaaccggctggtc
atgctggctgggctaaccgcccgcgaggtgacggtgctgcgtgcctatgcccgttatctg
cgccaggcaggcatcacctattcccagggttatatcgccgataccctcaacaaatatccg
acgatcgccgccgacatcttccggctcttctccacccgtatggatccgacgacggaggtg
aagacgcgcactaagaaatgcaacgccttgctggcggggatcgaggaggcactgtcagcc
gtgcccagcctcgatgaggacaggattctgcgccgatacgtcaacgcggtccagtcgacg
ctgcggacgaattacttccagaaggacgcggacggccggccgcgcgcggttctcgccttc
aagctcgacccgaaacagctcgacggcctgccggagccgcggcctttccgcgaaatcttc
gtctatggcaccgaagtggaaggtgtccatctgcgcttcggcaaggtggcgcgcggcggc
cttcgctggtcggaccgggcacaggattaccgcaccgaagtgctcggtctggtcaaggcg
cagcaggtgaagaacgccgttatcgtgccggtcggggccaagggcggcttctatcccaag
cagctgcctgccggcggcagccgcgacgagatcttcaaagcgggaaccgaggcgtacaag
acctacatccgcacgcttctctcggtcaccgataatattgtcggccaggaggttgtgcct
cccgcggatacgctgcggctcgacggcgacgacccctatttcgtcgtcgcggccgacaag
gggacagcgaccttctcggacacggcgaatgcgctcgcccaggaagcggacttctggctg
gacgacgccttcgcgtccggcggttccgcaggctatgaccacaagaaaatggggatcacc
gcccgcggggcatgggaagccgtcaagcggcacttccgcgaaatggatgtcgacatccag
accacgcctttcacagtcgccggcgtcggcgacatgtcgggcgacgtcttcggcaacggc
atgctgctgtcggaaaagatccgcctcatcgccgccttcgatcaccgtgacatcttcatt
gacccgaatccggatatcgatctctcctttgccgaacgcaagcgcattttcgcgctgccg
cgctccagctggcaggattatgaccggaaggcgctctcgcccggcgccatgatcatttca
cgttcggagaagctggtgacgctcaccccggaagcgatggcggcgatcgggatcgacaag
ccgaaggcgacgccgttcgagatcatgagcaccattctgaaaagcccggtcgacctcctc
tggttcggcggcatcggcacctatgtccgcggcagcggcgagacggatgcggaggtcggc
gaccgcgcaaacgatgcgatccgcatcaccgcggaggaggtgcgggcccgggtgatcggc
gagggggccaatctcggggtcacgcagaaaggccgtatcggcttttccctcaatggcggg
cgctgcaactccgacgccatcgacaattcggccggcgtcaattcctccgacgtcgaggtc
aacatcaagatcgcgctcgcctctgccatgcgcgacggacgcctgacccggccgaagcgc
aacacgcttctggcgtcgatgacggacgaagtcggacatctggtgctacgcaacaactac
cagcagtcgcttgcgatttcgctcaccgaaatgcaggggctcgccaaccgcacgccgctc
gcgcggctgatggcgcggctcggggccgacggccacctcaaccgcaaggtggagacgctt
ccgaccgatcaggcaatgagcgagcgctatcaggcgggccggccgctcacacgcccggag
atcggcgtgctgctctcctatgcgaaactggtcctgttcgacgaactgaccatcagcgat
cttccggacgatccctatttcacggcgacgctggagcgctacttcccggcaaagatgcgc
aagacctatgccggcgacattcacgggcaccggctgcgccgcgagatcatcgccactgtg
ctcgtcaacgaaacgataaaccgcggcgggcccgctttcgcctcgacgctgacggacgcc
accggcttcctttccgccgacgtcgtcaaggccgcggtgctggcactggacggtttcgat
ctgccgcgcatctatgccgagattgacgcgctcgacaaccggatcggcggcatgatccag
aacaggctctatcaggaggtgggacgcatctttgcccttgtcgcagcgagggtgctgcgc
acccgggcctccgagggctccgttgcggaagcggttgcgcggctgcgcgacggcctgcag
aagctgcgcggcaccatgcgggcggcaatctcccgggagggggccgaggaagcgcgtcag
aaggccgcgggcttcattgaaaacggcgtgccggcaaagctcgccgaggaaatcgcggag
ctctcgctgatgaccctcgttccggagatcatgcagatcgccatagtgaccggcgagccg
ctgaaccgcaccgcccaggcctatttcaccgtcaccgagagcctgagggtcaaccgcctg
cttgcggccgccgaccgggtgcctgccaccgagcagttcgaggcaatggccttgtcacgg
gccgtcggcgatatcggcaccgcgcgccgcgacatcacaatcgccgcgctcgtcgagtac
aagggcgaacggaatccggtcctcgcctggcaggaccgcgaccggcagcgtgtggcgagc
gtcggcgaccagctgaggctcctgaccgaaaagggtgaaacgacgctcgccaaggtgaca
gtcgcagccggcgtcctcagcgaccttgcacgcggctggacgaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

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